C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TBC1 domain family, member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000375064 TBC1D2-001 ENSG00000095383 9606 - 9:98199029-98255580 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000375064
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000375064 1.807±0.00 0.514±0.00 1.762±0.00 2.169±0.00 0.167±0.00 0.732±0.00 0.447±0.00 2.252±1.35 1.210±0.58 1.815±0.99 0.934±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00029Y CIL_00029Y_0001 CGP 9:98120975-98255721
CIL_00029Z CIL_00029Z_0001 CGP 9:98198999-98709197

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005097 IDA:IEA Rab GTPase activator activity
GO:0030054 IDA cell junction
GO:0031410 IDA cytoplasmic vesicle
GO:0032313 IEA regulation of Rab GTPase activity
GO:0032851 IDA positive regulation of Rab GTPase activity
GO:0045296 IPI cadherin binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000084621 Tbc1d2-001 protein_coding Mus_musculus 0 2490
ENSMUST00000107750 Tbc1d2-002 protein_coding Mus_musculus 0 612

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