C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tenascin XB
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000375244 TNXB-001 ENSG00000168477 9606 - 6:32041154-32109374 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000375244
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000375244 12.031±0.00 8.277±0.00 0.357±0.00 1.762±0.00 22.584±0.00 7.240±3.35 4.635±4.19 1.288±0.93 4.217±0.00 9.892±0.00 2.555±0.00 25.276±25.22 5.859±1.25 2.747±0.37

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000424 CIL_000424_0001 CGP 6:32014762-32041670

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000087399 Tnxb-001 protein_coding Mus_musculus 0 4442
ENSMUST00000168533 Tnxb-002 protein_coding Mus_musculus 0 2894
ENSMUST00000173277 Tnxa-001 unprocessed_pseudogene Mus_musculus 0 1022
ENSMUST00000025223 Cyp21a1-001 protein_coding Mus_musculus 8e-34 152

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