C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: microtubule-associated protein, RP/EB family, member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000375571 MAPRE1-001 ENSG00000101367 9606 + 20:32819893-32850405 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000375571
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000375571 40.249±0.00 34.673±0.00 7.703±0.00 15.448±10.28 24.362±5.18 27.304±13.68 12.474±7.05 18.378±15.39 13.153±7.89 34.370±16.89 6.578±2.93 45.996±38.22 59.676±22.55 37.986±7.83

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008A4 CIL_0008A4_0001 VISTA 20:32224531-32829311
CIL_0008NQ CIL_0008NQ_0001 VISTA 20:32326689-32928341
CIL_0008QN CIL_0008QN_0001 VISTA 20:32676112-33281064
CIL_0001KC CIL_0001KC_0001 CGP 20:32762385-32850405

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000086 TAS G2/M transition of mitotic cell cycle
GO:0000278 TAS mitotic cell cycle
GO:0005515 IPI:IEA protein binding
GO:0005737 IDA cytoplasm
GO:0005794 IEA Golgi apparatus
GO:0005813 IDA centrosome
GO:0005819 IDA spindle
GO:0005829 TAS cytosol
GO:0005874 IDA microtubule
GO:0005881 IEA cytoplasmic microtubule
GO:0007067 IEA mitotic nuclear division
GO:0008017 IEA microtubule binding
GO:0008022 TAS protein C-terminus binding
GO:0008283 TAS cell proliferation
GO:0015630 IEA microtubule cytoskeleton
GO:0030981 IDA cortical microtubule cytoskeleton
GO:0031115 IDA negative regulation of microtubule polymerization
GO:0031253 IEA cell projection membrane
GO:0035371 IEA microtubule plus-end
GO:0035372 IDA protein localization to microtubule
GO:0042995 IEA cell projection
GO:0044822 IDA poly(A) RNA binding
GO:0051010 IDA microtubule plus-end binding
GO:1903033 IEA positive regulation of microtubule plus-end binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000028981 Mapre1-001 protein_coding Mus_musculus 0 1868
ENSMUST00000123795 Mapre1-002 processed_transcript Mus_musculus 0 638
ENSMUST00000123570 Mapre1-003 processed_transcript Mus_musculus 0 403

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