C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: EF-hand domain family, member D2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000375980 EFHD2-001 ENSG00000142634 9606 + 1:15409895-15430343 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000375980
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000375980 19.233±0.00 40.410±0.00 0.642±0.00 31.140±19.97 10.433±4.45 18.252±10.30 3.616±2.95 8.052±4.61 5.792±1.98 26.984±23.79 0.949±0.92 58.485±53.40 38.997±1.97 62.530±23.15

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000036854 Efhd2-001 protein_coding Mus_musculus 0 959
ENSDART00000128829 efhd2-001 protein_coding Danio_rerio 0 390
ENSDART00000047008 efhd2-002 nonsense_mediated_decay Danio_rerio 0 390
ENSMUST00000027472 Efhd1-001 protein_coding Mus_musculus 0 305
ENSMUST00000118687 Efhd1-002 nonsense_mediated_decay Mus_musculus 0 305
ENSDART00000063779 efhd1-001 protein_coding Danio_rerio 0 231

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