C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: EF hand domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000036854 Efhd2-001 ENSMUSG00000040659 10090 - 4:141858142-141874920 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000036854
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000036854 25.064±3.24 30.525±2.82 38.111±4.38 38.041±14.77 47.456±18.69 133.223±21.56 12.106±2.77 17.441±0.97 21.862±3.13 52.706±9.16 2.560±0.49 36.081±12.21 54.932±26.18 29.702±1.81

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IDA calcium ion binding
GO:0005515 IPI protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000128829 efhd2-001 protein_coding Danio_rerio 0 385
ENSDART00000047008 efhd2-002 nonsense_mediated_decay Danio_rerio 0 385
ENST00000264059 EFHD1-001 protein_coding Homo_sapiens 0 329
ENST00000375980 EFHD2-001 protein_coding Homo_sapiens 0 959
ENST00000409613 EFHD1-003 protein_coding Homo_sapiens 0 285
ENST00000409708 EFHD1-002 protein_coding Homo_sapiens 0 279
ENST00000410095 EFHD1-004 protein_coding Homo_sapiens 0 279
ENST00000427698 EFHD1-007 protein_coding Homo_sapiens 0 255
ENST00000442845 EFHD1-006 nonsense_mediated_decay Homo_sapiens 0 279
ENST00000611312 EFHD1-201 protein_coding Homo_sapiens 0 279

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