C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tweety family member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000376531 TTYH1-003 ENSG00000167614 9606 + 19:54415526-54436719 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonHeartOvaryPlacentaTestisENST00000376531
Transcript ID Colon Heart Ovary Placenta Testis
ENST00000376531 1.372±0.00 0.196±0.00 1.909±0.00 0.263±0.00 20.495±13.42

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005M5 CIL_0005M5_0001 CGP 19:54351384-54436900
CIL_0005M4 CIL_0005M4_0001 CGP 19:54415219-54462037

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005381 NAS iron ion transmembrane transporter activity
GO:0005509 IEA calcium ion binding
GO:0005886 TAS plasma membrane
GO:0006821 IDA chloride transport
GO:0006826 NAS iron ion transport
GO:0007067 IEA mitotic nuclear division
GO:0016021 TAS integral component of membrane
GO:0016337 IEA single organismal cell-cell adhesion
GO:0030868 IEA smooth endoplasmic reticulum membrane
GO:0031527 IEA filopodium membrane
GO:0031589 IEA cell-substrate adhesion
GO:0032433 IEA filopodium tip
GO:0034220 TAS ion transmembrane transport
GO:0034707 IEA chloride channel complex
GO:0034755 NAS iron ion transmembrane transport
GO:0044070 IDA regulation of anion transport
GO:0046847 IEA filopodium assembly
GO:0055085 TAS transmembrane transport
GO:0072320 IDA volume-sensitive chloride channel activity
GO:1902476 IEA chloride transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000079415 Ttyh1-002 protein_coding Mus_musculus 0 1585
ENSMUST00000126971 Ttyh1-006 retained_intron Mus_musculus 0 1448
ENSMUST00000129423 Ttyh1-001 protein_coding Mus_musculus 0 1447
ENSMUST00000119661 Ttyh1-005 protein_coding Mus_musculus 0 1447
ENSMUST00000134536 Ttyh1-004 retained_intron Mus_musculus 0 1262
ENSMUST00000032594 Ttyh1-007 nonsense_mediated_decay Mus_musculus 0 1074
ENSMUST00000148760 Ttyh1-008 processed_transcript Mus_musculus 0 614
ENSMUST00000148951 Ttyh1-010 retained_intron Mus_musculus 0 562
ENSMUST00000130150 Ttyh1-003 processed_transcript Mus_musculus 0 494
ENSMUST00000153673 Ttyh1-015 nonsense_mediated_decay Mus_musculus 0 383
ENSMUST00000151959 Ttyh1-009 processed_transcript Mus_musculus 0 375
ENSMUST00000132400 Ttyh1-014 retained_intron Mus_musculus 0 250

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