C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: synapse differentiation inducing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000376862 SYNDIG1-001 ENSG00000101463 9606 + 20:24469199-24666616 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000376862
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000376862 0.072±0.00 2.648±0.00 0.840±0.00 8.166±2.59 0.232±0.04 0.171±0.11 3.621±2.71 3.057±0.00 0.349±0.00 0.474±0.00 1.041±0.73 0.933±0.29 1.836±1.47

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005887 ISS integral component of plasma membrane
GO:0006886 ISS intracellular protein transport
GO:0009607 IEA response to biotic stimulus
GO:0014069 ISS postsynaptic density
GO:0016021 IEA integral component of membrane
GO:0030054 IEA cell junction
GO:0031901 ISS early endosome membrane
GO:0035254 ISS glutamate receptor binding
GO:0042803 ISS protein homodimerization activity
GO:0043197 ISS dendritic spine
GO:0043198 ISS dendritic shaft
GO:0044297 ISS cell body
GO:0045211 IEA postsynaptic membrane
GO:0051965 IDA positive regulation of synapse assembly
GO:0060076 ISS excitatory synapse
GO:0097091 ISS synaptic vesicle clustering

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000109935 Syndig1-001 protein_coding Mus_musculus 0 1199
ENSMUST00000109934 Syndig1-003 protein_coding Mus_musculus 0 1103
ENSMUST00000095550 Syndig1l-201 protein_coding Mus_musculus 7e-33 147

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