C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: synapse differentiation inducing 1 like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000095550 Syndig1l-201 ENSMUSG00000071234 10090 - 12:84677278-84698807 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000095550
Transcript ID Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000095550 0.024±0.01 0.013±0.00 1.796±0.72 0.286±0.11 0.178±0.12 0.020±0.00 0.042±0.01 0.026±0.01 0.023±0.00 0.037±0.02 0.082±0.06 3.217±1.36

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004KJ CIL_0004KJ_0003 CGP 12:84641019-84698807
CIL_0005BB CIL_0005BB_0002 CGP 12:84677278-84773112

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005794 IDA Golgi apparatus
GO:0008150 ND biological_process
GO:0009607 IEA response to biotic stimulus
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000062154 syndig1l-201 protein_coding Danio_rerio 6e-29 134
ENSDART00000153311 syndig1l-001 protein_coding Danio_rerio 6e-29 134
ENST00000331628 SYNDIG1L-201 protein_coding Homo_sapiens 0 959
ENST00000376862 SYNDIG1-001 protein_coding Homo_sapiens 7e-33 147
ENST00000482637 SYNDIG1-002 processed_transcript Homo_sapiens 1e-18 97
ENST00000554823 SYNDIG1L-001 protein_coding Homo_sapiens 0 809

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