C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 11, 17.3kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000377811 NDUFB11-001 ENSG00000147123 9606 - X:47142216-47145504 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000377811
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000377811 5.481±0.00 8.824±0.00 5.384±0.00 5.967±0.00 16.576±12.91 10.124±2.31 15.159±12.44 9.375±4.14 27.589±1.77 17.622±9.33 35.992±2.59

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005GB CIL_0005GB_0001 CGP X:47078355-47145504
CIL_0005GA CIL_0005GA_0001 CGP X:47142216-47186813

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005743 TAS mitochondrial inner membrane
GO:0005747 IDA mitochondrial respiratory chain complex I
GO:0016021 IEA integral component of membrane
GO:0022904 TAS respiratory electron transport chain
GO:0044237 TAS cellular metabolic process
GO:0044281 TAS small molecule metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000116621 Ndufb11-001 protein_coding Mus_musculus 0 399
ENSMUST00000119611 Gm6444-001 processed_pseudogene Mus_musculus 0 348
ENSMUST00000115375 Rbm10-004 protein_coding Mus_musculus 0 315

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