C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Ras suppressor protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000377911 RSU1-003 ENSG00000148484 9606 - 10:16593313-16817463 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000377911
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000377911 36.698±0.00 36.597±0.00 5.581±0.00 9.467±2.32 23.281±4.78 27.096±11.94 10.559±2.76 16.855±7.82 14.819±7.23 22.342±1.03 7.457±0.82 27.814±10.72 29.066±4.58 14.816±6.47

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00045Y CIL_00045Y_0002 CGP 10:16513743-16817528
CIL_00063X CIL_00063X_0002 CGP 10:16590611-17129831

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000028059 Rsu1-001 protein_coding Mus_musculus 0 891
ENSMUST00000114791 Rsu1-006 protein_coding Mus_musculus 0 837
ENSMUST00000161912 Rsu1-007 nonsense_mediated_decay Mus_musculus 0 745
ENSMUST00000162223 Rsu1-008 retained_intron Mus_musculus 0 595
ENSMUST00000134551 Rsu1-002 nonsense_mediated_decay Mus_musculus 0 542
ENSMUST00000131226 Rsu1-003 retained_intron Mus_musculus 0 296

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