C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Ras suppressor protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000028059 Rsu1-001 ENSMUSG00000026727 10090 - 2:13076967-13271431 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000028059
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028059 41.139±2.50 13.187±4.49 81.260±7.20 10.945±3.84 20.294±2.13 14.581±1.05 13.777±1.76 18.658±0.72 22.013±12.96 31.080±2.03 10.954±0.84 20.909±10.87 34.624±8.10 2.828±0.80

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00045Y CIL_00045Y_0003 CGP 2:13003457-13271431
CIL_00063X CIL_00063X_0003 CGP 2:13076967-13491924

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005925 IEA focal adhesion
GO:0007265 IMP Ras protein signal transduction
GO:0010811 IEA positive regulation of cell-substrate adhesion
GO:0043547 IEA positive regulation of GTPase activity
GO:0070062 IEA extracellular vesicular exosome
GO:2000179 IGI positive regulation of neural precursor cell proliferation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000345264 RSU1-001 protein_coding Homo_sapiens 0 1016
ENST00000377911 RSU1-003 processed_transcript Homo_sapiens 0 891
ENST00000377921 RSU1-002 protein_coding Homo_sapiens 0 1024
ENST00000423875 RSU1P2-002 retained_intron Homo_sapiens 1e-28 132
ENST00000437884 RSU1P2-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 440
ENST00000448600 RSU1P2-005 processed_transcript Homo_sapiens 0 239
ENST00000453416 RSU1P1-001 unprocessed_pseudogene Homo_sapiens 0 486
ENST00000464074 RSU1-004 processed_transcript Homo_sapiens 0 542
ENST00000602389 RSU1-201 protein_coding Homo_sapiens 0 891
ENST00000619977 RSU1P2-004 processed_transcript Homo_sapiens 0 257

Loading