C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: tripartite motif containing 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000378183 TRIM13-004 ENSG00000204977 9606 + 13:49996503-50012740 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENST00000378183
Transcript ID Testis
ENST00000378183 13.893±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004PF CIL_0004PF_0002 CGP 13:49912706-50020481
CIL_0000UW CIL_0000UW_0001 CGP 13:49995888-50020922

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0008270 IEA zinc ion binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000039562 Trim13-201 protein_coding Mus_musculus 0 1005
ENSMUST00000165015 Trim13-202 protein_coding Mus_musculus 0 1005
ENSMUST00000163721 Gm9359-001 processed_pseudogene Mus_musculus 0 865

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