C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000UW_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000204977-ENSG00000198553 CGP 9606 13:49995888-50020922
GeneTranscriptPositionBiotype
ENSG00000204977 (TRIM13)
tripartite motif containing 13 		ENST00000356017 (TRIM13-006) 49997037-50013180 protein_coding
ENST00000378182 (TRIM13-005) 49997032-50018451 protein_coding
ENST00000378183 (TRIM13-004) 49996503-50012740 protein_coding
ENST00000420995 (TRIM13-001) 49997019-50014331 protein_coding
ENST00000442421 (TRIM13-002) 49995888-50012327 protein_coding
ENST00000457662 (TRIM13-003) 49997059-50013168 protein_coding
ENST00000474805 (TRIM13-007) 49996813-50020481 processed_transcript
ENST00000478111 (TRIM13-008) 49997019-50020481 processed_transcript

Homo sapiens Ensembl (GRCh38)

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CIL_0000UW_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000035235-ENSMUSG00000046168 CGP 10090 14:61598226-61611916
GeneTranscriptPositionBiotype
ENSMUSG00000035235 (Trim13)
tripartite motif-containing 13 		ENSMUST00000039562 (Trim13-201) 61599512-61605946 protein_coding
ENSMUST00000165015 (Trim13-202) 61598226-61605946 protein_coding
ENSMUSG00000046168 (Kcnrg)
potassium channel regulator 		ENSMUST00000051184 (Kcnrg-201) 61607482-61611916 protein_coding
ENSMUSG00000097589 (Dleu2)
deleted in lymphocytic leukemia, 2 		ENSMUST00000180377 (Dleu2-002) 61619473-61682325 lincRNA
ENSMUST00000180917 (Dleu2-005) 61632349-61648822 lincRNA
ENSMUST00000182259 (Dleu2-004) 61603034-61682314 lincRNA
ENSMUST00000182286 (Dleu2-011) 61635227-61682314 lincRNA
ENSMUST00000182325 (Dleu2-006) 61603724-61648787 lincRNA
ENSMUST00000182537 (Dleu2-012) 61643342-61682313 lincRNA
ENSMUST00000182756 (Dleu2-007) 61632299-61648622 lincRNA
ENSMUST00000182768 (Dleu2-001) 61602839-61682373 lincRNA
ENSMUST00000182957 (Dleu2-010) 61643416-61682325 lincRNA
ENSMUST00000183054 (Dleu2-014) 61603589-61648822 lincRNA
ENSMUST00000183066 (Dleu2-013) 61603472-61682302 lincRNA
ENSMUST00000183079 (Dleu2-015) 61625183-61648762 lincRNA
ENSMUST00000183245 (Dleu2-003) 61628606-61682325 lincRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000UW_0001ENSG00000204977ENST00000356017ENST00000378182ENST00000378183ENST00000420995ENST00000442421ENST00000457662ENST00000474805ENST00000478111CIL_0000UW_0002ENSMUSG00000035235ENSMUST00000039562ENSMUST00000165015ENSMUSG00000046168ENSMUST00000051184ENSMUSG00000097589ENSMUST00000180377ENSMUST00000180917ENSMUST00000182259ENSMUST00000182286ENSMUST00000182325ENSMUST00000182537ENSMUST00000182756ENSMUST00000182768ENSMUST00000182957ENSMUST00000183054ENSMUST00000183066ENSMUST00000183079ENSMUST00000183245
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000UW_0001ENSG00000204977ENST00000356017ENST00000378182ENST00000378183ENST00000420995ENST00000457662CIL_0000UW_0002ENSMUSG00000035235ENSMUST00000039562ENSMUST00000165015ENSMUSG00000046168ENSMUST00000051184ENSMUSG00000097589ENSMUST00000180377ENSMUST00000180917ENSMUST00000182259ENSMUST00000182286ENSMUST00000182537ENSMUST00000182756ENSMUST00000182768ENSMUST00000182957ENSMUST00000183054ENSMUST00000183066ENSMUST00000183079ENSMUST00000183245
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000204977 ENST00000356017 N/A N/A N/A 2.721±0.00 2.662±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000378182 0.808±0.00 1.154±0.00 N/A 1.032±0.60 1.661±0.43 1.456±0.97 0.812±0.18 1.282±0.14 2.246±0.00 1.577±0.22 N/A 1.498±0.12 0.582±0.19 1.509±0.00
ENST00000378183 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.893±0.00
ENST00000420995 N/A N/A N/A N/A N/A N/A N/A N/A 4.455±0.00 N/A N/A N/A N/A N/A
ENST00000442421 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000457662 2.870±0.00 7.945±0.00 4.229±0.00 2.381±0.00 N/A 4.534±1.58 4.452±0.00 5.295±0.00 2.514±0.00 9.373±2.37 3.843±0.19 7.591±1.33 5.317±1.18 41.247±16.92
ENST00000474805 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478111 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000035235 ENSMUST00000039562 2.667±0.65 0.772±0.00 13.851±2.84 11.083±7.48 2.039±1.34 0.898±0.25 3.069±0.58 3.207±0.44 1.548±1.01 3.450±0.81 4.437±0.84 3.293±2.01 4.916±2.37 3.341±1.10
ENSMUST00000165015 N/A 1.067±0.42 N/A N/A N/A 0.711±0.00 N/A N/A 0.807±0.46 N/A N/A 1.755±1.08 0.787±0.34 5.153±0.84
ENSMUSG00000046168 ENSMUST00000051184 0.087±0.01 0.217±0.08 0.605±0.07 1.066±0.49 0.187±0.09 0.177±0.08 0.518±0.34 0.286±0.12 0.373±0.19 1.049±0.00 0.205±0.05 1.767±0.99 0.433±0.25 0.157±0.07
ENSMUSG00000097589 ENSMUST00000180377 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.908±0.00 N/A
ENSMUST00000180917 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.429±0.00 N/A
ENSMUST00000182259 N/A N/A N/A N/A 1.383±0.00 N/A 0.986±0.38 N/A 1.063±0.00 N/A 0.877±0.22 N/A N/A N/A
ENSMUST00000182286 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.671±0.00 N/A N/A
ENSMUST00000182325 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182537 1.850±0.00 4.170±1.76 N/A N/A 4.632±1.44 1.697±0.58 N/A 7.176±0.00 4.223±0.00 3.182±0.00 N/A 1.084±0.50 N/A N/A
ENSMUST00000182756 0.286±0.00 N/A N/A N/A N/A N/A 0.209±0.03 N/A N/A 0.720±0.00 N/A 0.147±0.02 0.139±0.00 N/A
ENSMUST00000182768 0.877±0.31 1.485±0.47 2.640±0.10 0.673±0.00 1.655±0.82 0.931±0.45 0.662±0.09 2.532±0.49 3.042±1.07 1.826±0.30 1.036±0.00 1.436±1.33 1.942±1.46 N/A
ENSMUST00000182957 N/A N/A N/A N/A N/A 0.620±0.00 N/A N/A N/A N/A N/A 1.043±0.00 N/A N/A
ENSMUST00000183054 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.351±0.00 N/A N/A
ENSMUST00000183066 1.271±0.57 N/A N/A N/A N/A 1.638±0.08 1.748±0.00 2.788±0.53 3.697±1.72 1.954±0.00 N/A 1.745±0.68 0.742±0.18 N/A
ENSMUST00000183079 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.401±0.00 N/A N/A
ENSMUST00000183245 N/A 3.199±0.56 N/A N/A N/A 1.109±0.00 N/A 2.786±0.00 N/A N/A N/A 2.856±0.00 N/A N/A

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