C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: integral membrane protein 2B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000378565 ITM2B-001 ENSG00000136156 9606 + 13:48233158-48270357 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000378565
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000378565 15.581±0.00 14.639±0.00 8.158±0.00 15.000±6.87 10.532±5.46 8.961±5.42 6.430±4.11 22.443±17.22 5.387±0.68 17.129±8.61 2.124±1.16 16.755±11.47 45.153±12.56 14.010±7.33

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00021H CIL_00021H_0002 CGP 13:48053323-48270357

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001540 IPI beta-amyloid binding
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005576 TAS extracellular region
GO:0005615 IDA extracellular space
GO:0005768 IEA endosome
GO:0005794 IDA Golgi apparatus
GO:0005886 IDA plasma membrane
GO:0007399 TAS nervous system development
GO:0016020 IDA membrane
GO:0030660 IDA Golgi-associated vesicle membrane
GO:0031301 IDA integral component of organelle membrane
GO:0042985 IDA negative regulation of amyloid precursor protein biosynthetic process
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0070062 IDA extracellular vesicular exosome
GO:0097192 IEA extrinsic apoptotic signaling pathway in absence of ligand

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000022704 Itm2b-201 protein_coding Mus_musculus 0 1341

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