C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00021H_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000041503-ENSDARG00000041505 CGP 7955 9:26354025-26379928
GeneTranscriptPositionBiotype
ENSDARG00000041503 (med4)
mediator complex subunit 4 		ENSDART00000060840 (med4-001) 26354025-26361872 protein_coding
ENSDARG00000041505 (itm2bb)
integral membrane protein 2Bb 		ENSDART00000101470 (itm2bb-001) 26364250-26379928 protein_coding
ENSDART00000125410 (itm2bb-002) 26364316-26371072 processed_transcript
CIL_00021H_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000136146-ENSG00000136156 CGP 9606 13:48053323-48270357
GeneTranscriptPositionBiotype
ENSG00000136146 (MED4)
mediator complex subunit 4 		ENST00000258648 (MED4-001) 48075956-48095104 protein_coding
ENST00000378586 (MED4-002) 48076968-48095131 protein_coding
ENST00000417167 (MED4-003) 48077171-48095068 protein_coding
ENST00000495013 (MED4-005) 48053323-48079975 non_stop_decay
ENSG00000136156 (ITM2B)
integral membrane protein 2B 		ENST00000378549 (ITM2B-003) 48233203-48261388 protein_coding
ENST00000378565 (ITM2B-001) 48233158-48270357 protein_coding
ENST00000463839 (ITM2B-002) 48261137-48263195 nonsense_mediated_decay
ENST00000607866 (ITM2B-004) 48253875-48258941 nonsense_mediated_decay
ENSG00000224510 (POLR2KP2)
polymerase (RNA) II (DNA directed) polypeptide K, 7.0kDa pseudogene 2 		ENST00000438155 (POLR2KP2-001) 48134358-48134534 processed_pseudogene
ENSG00000229111 (MED4-AS1)
MED4 antisense RNA 1 		ENST00000422483 (MED4-AS1-001) 48077137-48079991 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00021H_0001ENSDARG00000041503ENSDART00000060840ENSDARG00000041505ENSDART00000101470ENSDART00000125410CIL_00021H_0002ENSG00000136146ENST00000258648ENST00000378586ENST00000417167ENST00000495013ENSG00000136156ENST00000378549ENST00000378565ENST00000463839ENST00000607866ENSG00000224510ENST00000438155ENSG00000229111ENST00000422483
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00021H_0001ENSDARG00000041503ENSDART00000060840ENSDARG00000041505ENSDART00000101470CIL_00021H_0002ENSG00000136146ENST00000258648ENST00000378586ENSG00000136156ENST00000378549ENST00000378565ENST00000607866ENSG00000224510ENST00000438155ENSG00000229111ENST00000422483
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000041503 ENSDART00000060840 N/A N/A N/A 4.216±3.06 N/A N/A 6.153±0.76 14.800±0.00 0.645±0.00 N/A 3.754±0.00 N/A N/A N/A
ENSDARG00000041505 ENSDART00000101470 N/A N/A N/A 17.995±9.41 N/A N/A 253.709±127.49 274.069±71.89 31.845±0.00 N/A 41.876±0.00 N/A N/A N/A
ENSDART00000125410 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000136146 ENST00000258648 4.926±0.00 7.485±0.00 0.261±0.00 3.642±1.48 3.396±2.55 3.969±1.86 5.102±0.00 2.990±2.02 2.306±1.05 2.001±1.32 1.974±1.76 5.868±3.64 7.596±2.39 9.163±4.51
ENST00000378586 6.244±0.00 10.766±0.00 N/A 3.635±2.83 3.757±2.23 3.092±2.32 5.330±0.00 8.478±0.00 2.062±0.13 4.321±0.00 5.116±0.00 16.461±8.43 10.023±1.69 16.547±2.58
ENST00000417167 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495013 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000136156 ENST00000378549 256.777±0.00 210.489±0.00 52.140±0.00 149.907±122.20 153.185±132.04 125.287±109.03 115.966±104.06 333.788±303.90 69.970±48.69 287.373±246.15 38.165±29.91 199.760±159.39 979.277±398.86 195.466±145.34
ENST00000378565 15.581±0.00 14.639±0.00 8.158±0.00 15.000±6.87 10.532±5.46 8.961±5.42 6.430±4.11 22.443±17.22 5.387±0.68 17.129±8.61 2.124±1.16 16.755±11.47 45.153±12.56 14.010±7.33
ENST00000463839 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000607866 211.972±0.00 184.460±0.00 83.991±0.00 140.219±82.36 135.812±94.79 112.275±83.83 115.168±96.19 267.804±236.51 70.024±33.80 251.276±203.30 43.942±32.04 181.108±129.73 906.337±436.30 152.028±108.52
ENSG00000224510 ENST00000438155 N/A N/A N/A N/A N/A N/A N/A N/A 1.248±0.00 N/A N/A N/A N/A N/A
ENSG00000229111 ENST00000422483 8.380±0.00 13.638±0.00 N/A 12.223±0.00 6.853±2.87 8.223±0.00 8.034±0.00 13.711±0.00 6.557±0.00 7.420±0.00 3.878±3.47 84.844±0.00 49.152±0.00 45.692±26.16

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