C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | mesoderm specific transcript | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000378576  |
MEST-004 |
ENSG00000106484 |
9606 | + |
7:130486354-130506292  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008PP | CIL_0008PP_0001 | VISTA | 7:130073108-130674619 |
| CIL_0006OS | CIL_0006OS_0001 | CGP | 7:130393771-130506296 |
| CIL_000271 | CIL_000271_0001 | CGP | 7:130486171-130668748 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003824 | IEA | catalytic activity |
| GO:0005783 | ISS | endoplasmic reticulum |
| GO:0007498 | TAS | mesoderm development |
| GO:0008152 | IEA | metabolic process |
| GO:0016021 | IEA | integral component of membrane |
| GO:0016787 | IEA | hydrolase activity |
| GO:0070062 | IDA | extracellular vesicular exosome |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000163949
|
Mest-201 | protein_coding | Mus_musculus | 0 | 795 |
|
ENSMUST00000128398
|
Mest-001 | protein_coding | Mus_musculus | 0 | 717 |
|
ENSMUST00000157040
|
Mest-002 | protein_coding | Mus_musculus | 0 | 713 |
|
ENSMUST00000124665
|
Mest-005 | protein_coding | Mus_musculus | 0 | 712 |
|
ENSMUST00000147400
|
Mest-004 | protein_coding | Mus_musculus | 0 | 549 |
|
ENSMUST00000137521
|
Mest-009 | processed_transcript | Mus_musculus | 0 | 518 |
|
ENSMUST00000130751
|
Mest-010 | processed_transcript | Mus_musculus | 0 | 470 |
|
ENSMUST00000149496
|
Mest-011 | retained_intron | Mus_musculus | 0 | 366 |
