C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cardiolipin synthase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000378863 CRLS1-001 ENSG00000088766 9606 + 20:6006090-6040053 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000378863
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000378863 3.563±0.00 1.331±0.00 0.451±0.00 1.228±0.09 2.544±0.83 1.829±0.16 4.958±2.67 6.312±1.11 7.568±0.00 1.947±1.13 4.268±1.59 1.978±0.48 3.271±1.28

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007A0 CIL_0007A0_0002 CGP 20:5950652-6040053
CIL_0002H5 CIL_0002H5_0001 CGP 20:6006090-6054049

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 IEA mitochondrion
GO:0005743 TAS mitochondrial inner membrane
GO:0006644 TAS phospholipid metabolic process
GO:0008654 IEA phospholipid biosynthetic process
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016780 IEA phosphotransferase activity, for other substituted phosphate groups
GO:0032049 TAS cardiolipin biosynthetic process
GO:0036148 TAS phosphatidylglycerol acyl-chain remodeling
GO:0044281 TAS small molecule metabolic process
GO:0046474 TAS glycerophospholipid biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000028835 Crls1-001 protein_coding Mus_musculus 0 1197
ENSMUST00000124836 Crls1-003 protein_coding Mus_musculus 0 1007
ENSMUST00000154160 Crls1-004 protein_coding Mus_musculus 0 793
ENSMUST00000124834 Crls1-002 nonsense_mediated_decay Mus_musculus 0 641
ENSMUST00000110122 Crls1-005 protein_coding Mus_musculus 1.00053e-42 180

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