C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007A0_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000074326-ENSDARG00000038000 CGP 7955 17:4092735-4153124
GeneTranscriptPositionBiotype
ENSDARG00000038000 (crls1)
cardiolipin synthase 1 		ENSDART00000055385 (crls1-001) 4135899-4153124 protein_coding
ENSDARG00000074326 (mcm8)
minichromosome maintenance complex component 8 		ENSDART00000114691 (mcm8-201) 4095621-4132116 protein_coding
ENSDART00000154264 (mcm8-001) 4092735-4132361 protein_coding
ENSDART00000156803 (mcm8-002) 4123814-4132361 protein_coding
CIL_0007A0_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000125885-ENSG00000088766 CGP 9606 20:5950652-6040053
GeneTranscriptPositionBiotype
ENSG00000088766 (CRLS1)
cardiolipin synthase 1 		ENST00000378863 (CRLS1-001) 6006090-6040053 protein_coding
ENST00000378868 (CRLS1-005) 6007252-6037393 protein_coding
ENST00000452938 (CRLS1-201) 6006093-6040043 protein_coding
ENST00000464921 (CRLS1-004) 6028271-6034555 processed_transcript
ENST00000478846 (CRLS1-003) 6031163-6037391 processed_transcript
ENST00000489345 (CRLS1-002) 6009779-6034523 processed_transcript
ENST00000609154 (CRLS1-006) 6007256-6016055 retained_intron
ENSG00000125885 (MCM8)
minichromosome maintenance complex component 8 		ENST00000265187 (MCM8-002) 5950931-5995206 protein_coding
ENST00000378883 (MCM8-201) 5950652-5995206 protein_coding
ENST00000378886 (MCM8-202) 5950652-5995206 protein_coding
ENST00000378896 (MCM8-203) 5950652-5995206 protein_coding
ENST00000610722 (MCM8-001) 5950652-5995894 protein_coding
ENSG00000231961 (RP5-967N21.7)
 ENST00000421490 (RP5-967N21.7-001) 5965180-5965511 processed_pseudogene
ENSG00000263473 (AL035461.1)
 ENST00000583129 (AL035461.1-201) 5992260-5992353 miRNA
ENSG00000263755 (RN7SL498P)
RNA, 7SL, cytoplasmic 498, pseudogene 		ENST00000583650 (RN7SL498P-201) 6001733-6002030 misc_RNA
ENSG00000275632 (RP5-967N21.11)
 ENST00000619201 (RP5-967N21.11-001) 6000418-6000941 lincRNA
ENSG00000278719 (MCM8-AS1)
MCM8 antisense RNA 1 		ENST00000613522 (MCM8-AS1-001) 5990943-6005821 antisense
CIL_0007A0_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027353-ENSMUSG00000027357 CGP 10090 2:132816141-132866785
GeneTranscriptPositionBiotype
ENSMUSG00000027353 (Mcm8)
minichromosome maintenance deficient 8 (S. cerevisiae) 		ENSMUST00000028831 (Mcm8-001) 132816141-132843895 protein_coding
ENSMUST00000066559 (Mcm8-002) 132816141-132844197 protein_coding
ENSMUST00000135685 (Mcm8-003) 132816224-132818025 processed_transcript
ENSMUSG00000027357 (Crls1)
cardiolipin synthase 1 		ENSMUST00000028835 (Crls1-001) 132846666-132866785 protein_coding
ENSMUST00000110122 (Crls1-005) 132846676-132864135 protein_coding
ENSMUST00000124834 (Crls1-002) 132846688-132866785 nonsense_mediated_decay
ENSMUST00000124836 (Crls1-003) 132847734-132866441 protein_coding
ENSMUST00000154160 (Crls1-004) 132847738-132865887 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007A0_0001ENSDARG00000038000ENSDART00000055385ENSDARG00000074326ENSDART00000114691ENSDART00000154264ENSDART00000156803CIL_0007A0_0002ENSG00000088766ENST00000378863ENST00000378868ENST00000452938ENST00000464921ENST00000478846ENST00000489345ENST00000609154ENSG00000125885ENST00000265187ENST00000378883ENST00000378886ENST00000378896ENST00000610722ENSG00000231961ENST00000421490ENSG00000263473ENST00000583129ENSG00000263755ENST00000583650ENSG00000275632ENST00000619201ENSG00000278719ENST00000613522CIL_0007A0_0003ENSMUSG00000027353ENSMUST00000028831ENSMUST00000066559ENSMUST00000135685ENSMUSG00000027357ENSMUST00000028835ENSMUST00000110122ENSMUST00000124834ENSMUST00000124836ENSMUST00000154160
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007A0_0001ENSDARG00000038000ENSDART00000055385ENSDARG00000074326ENSDART00000114691ENSDART00000154264ENSDART00000156803CIL_0007A0_0002ENSG00000088766ENST00000378863ENST00000378868ENST00000452938ENST00000478846ENST00000489345ENSG00000125885ENST00000265187ENST00000378883ENST00000378886ENST00000378896ENST00000610722ENSG00000231961ENST00000421490ENSG00000263473ENST00000583129ENSG00000263755ENST00000583650ENSG00000275632ENST00000619201ENSG00000278719ENST00000613522CIL_0007A0_0003ENSMUSG00000027353ENSMUST00000028831ENSMUST00000066559ENSMUSG00000027357ENSMUST00000028835ENSMUST00000110122ENSMUST00000124834ENSMUST00000124836ENSMUST00000154160
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000038000 ENSDART00000055385 N/A N/A N/A 4.370±1.07 N/A N/A 7.817±4.88 12.247±3.73 2.902±0.00 N/A 9.580±0.00 N/A N/A N/A
ENSDARG00000074326 ENSDART00000114691 N/A N/A N/A 0.323±0.14 N/A N/A 0.017±0.00 N/A N/A N/A 0.247±0.00 N/A N/A N/A
ENSDART00000154264 N/A N/A N/A 0.223±0.08 N/A N/A N/A 1.766±0.00 0.015±0.00 N/A N/A N/A N/A N/A
ENSDART00000156803 N/A N/A N/A N/A N/A N/A N/A 1.702±0.50 0.070±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000088766 ENST00000378863 3.563±0.00 1.331±0.00 0.451±0.00 1.228±0.09 2.544±0.83 1.829±0.16 4.958±2.67 6.312±1.11 7.568±0.00 N/A 1.947±1.13 4.268±1.59 1.978±0.48 3.271±1.28
ENST00000378868 11.153±0.00 3.641±0.00 2.724±0.00 2.891±1.03 8.262±5.07 8.990±0.00 17.151±11.23 12.438±0.66 16.087±11.72 14.442±0.00 8.121±3.61 10.572±5.03 7.643±2.45 12.174±2.51
ENST00000452938 N/A N/A N/A 0.686±0.00 N/A N/A N/A N/A N/A 3.819±0.00 N/A N/A N/A N/A
ENST00000464921 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478846 7.604±0.00 3.917±0.00 N/A N/A N/A 3.527±0.00 N/A N/A N/A N/A N/A 8.975±0.00 N/A N/A
ENST00000489345 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.298±0.00 4.802±0.00
ENST00000609154 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000125885 ENST00000265187 0.383±0.00 N/A N/A N/A 0.330±0.00 0.405±0.00 0.471±0.00 0.518±0.06 0.271±0.00 N/A 0.415±0.00 2.711±3.04 N/A 4.481±2.90
ENST00000378883 N/A N/A N/A 0.088±0.00 N/A N/A N/A N/A 0.131±0.00 N/A N/A N/A N/A N/A
ENST00000378886 N/A N/A N/A 0.111±0.00 0.812±0.00 0.178±0.00 N/A 0.170±0.00 0.069±0.00 N/A N/A N/A 0.153±0.00 0.897±0.00
ENST00000378896 N/A N/A N/A 0.222±0.16 N/A 1.031±0.00 0.304±0.10 N/A N/A N/A 0.215±0.00 1.055±0.00 0.530±0.05 N/A
ENST00000610722 N/A 0.508±0.00 N/A 0.081±0.00 N/A N/A N/A N/A N/A N/A 0.288±0.02 2.117±1.57 0.982±0.00 2.905±1.41
ENSG00000231961 ENST00000421490 N/A N/A N/A N/A N/A 0.527±0.00 N/A N/A N/A N/A N/A 0.914±0.69 N/A 0.683±0.00
ENSG00000263473 ENST00000583129 N/A 0.637±0.00 N/A N/A N/A N/A 0.606±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000263755 ENST00000583650 N/A 0.065±0.00 N/A 0.221±0.00 N/A 0.062±0.00 N/A 0.203±0.00 0.242±0.00 N/A 0.058±0.00 N/A N/A 0.305±0.00
ENSG00000275632 ENST00000619201 0.217±0.00 1.506±0.00 N/A 0.349±0.00 0.895±0.69 0.288±0.08 0.542±0.35 0.650±0.00 0.700±0.49 0.317±0.12 0.614±0.00 1.585±0.47 0.235±0.10 1.191±0.45
ENSG00000278719 ENST00000613522 N/A N/A 0.049±0.00 0.040±0.00 0.026±0.00 0.098±0.00 N/A 0.052±0.00 N/A N/A 0.114±0.00 N/A N/A 0.843±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027353 ENSMUST00000028831 1.076±0.22 N/A 0.927±0.05 1.631±0.23 0.640±0.08 0.454±0.04 0.550±0.08 0.410±0.25 2.040±1.78 0.166±0.00 0.527±0.11 2.172±1.06 3.355±2.22 0.711±0.41
ENSMUST00000066559 1.146±0.07 1.938±0.43 0.185±0.00 0.365±0.00 0.600±0.20 0.669±0.32 N/A 0.498±0.11 0.487±0.27 0.356±0.11 0.149±0.08 2.085±0.91 N/A 1.349±0.64
ENSMUST00000135685 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000027357 ENSMUST00000028835 10.214±2.39 23.625±6.22 9.732±0.92 8.068±3.63 16.570±4.13 13.464±2.79 8.222±2.00 20.108±1.38 15.980±7.94 9.836±2.28 4.883±0.40 10.031±3.94 8.549±5.20 8.130±1.48
ENSMUST00000110122 N/A 38.480±19.56 N/A N/A 4.245±0.83 17.625±3.53 N/A N/A N/A N/A N/A 9.218±3.13 N/A N/A
ENSMUST00000124834 N/A 6.107±1.14 N/A 2.249±0.00 3.080±0.00 N/A N/A N/A N/A N/A N/A 4.166±2.09 N/A N/A
ENSMUST00000124836 9.129±1.80 N/A N/A 3.507±0.00 18.569±9.14 N/A 3.082±0.72 6.094±0.00 4.903±1.75 4.306±0.00 N/A N/A 4.899±0.81 44.424±19.91
ENSMUST00000154160 N/A N/A N/A N/A 18.188±3.77 N/A 4.775±0.25 N/A 17.541±2.69 N/A 2.154±0.14 12.989±0.00 8.065±0.00 39.657±16.70

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