C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cardiolipin synthase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000378868 CRLS1-005 ENSG00000088766 9606 + 20:6007252-6037393 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000378868
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000378868 11.153±0.00 3.641±0.00 2.724±0.00 2.891±1.03 8.262±5.07 8.990±0.00 17.151±11.23 12.438±0.66 16.087±11.72 14.442±0.00 8.121±3.61 10.572±5.03 7.643±2.45 12.174±2.51

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007A0 CIL_0007A0_0002 CGP 20:5950652-6040053
CIL_0002H5 CIL_0002H5_0001 CGP 20:6006090-6054049

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005743 TAS mitochondrial inner membrane
GO:0006644 TAS phospholipid metabolic process
GO:0008444 IEA CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity
GO:0008654 IEA phospholipid biosynthetic process
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016780 IEA phosphotransferase activity, for other substituted phosphate groups
GO:0032049 TAS cardiolipin biosynthetic process
GO:0036148 TAS phosphatidylglycerol acyl-chain remodeling
GO:0044281 TAS small molecule metabolic process
GO:0046474 TAS glycerophospholipid biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000124836 Crls1-003 protein_coding Mus_musculus 0 952
ENSMUST00000028835 Crls1-001 protein_coding Mus_musculus 0 948
ENSMUST00000154160 Crls1-004 protein_coding Mus_musculus 0 867
ENSMUST00000124834 Crls1-002 nonsense_mediated_decay Mus_musculus 0 580
ENSMUST00000110122 Crls1-005 protein_coding Mus_musculus 2.99878e-43 180

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