C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: polymerase (RNA) II (DNA directed) polypeptide J3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000379340 POLR2J3-003 ENSG00000168255 9606 - 7:102537919-102572539 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003899 IEA DNA-directed RNA polymerase activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0046983 IEA protein dimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000041366 Polr2j-001 protein_coding Mus_musculus 0 399
ENSMUST00000111127 Polr2j-003 protein_coding Mus_musculus 0 399
ENSDART00000050902 polr2j-001 protein_coding Danio_rerio 0 211
ENSMUST00000111129 Polr2j-002 protein_coding Mus_musculus 8e-16 90
ENSMUST00000030474 Nsun4-002 nonsense_mediated_decay Mus_musculus 0.0001 53

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