C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pleckstrin homology domain containing, family G (with RhoGef domain) member 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000379344 PLEKHG4-005 ENSG00000196155 9606 + 16:67279524-67289473 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastHeartKidneyLungOvaryTestisENST00000379344
Transcript ID Adipose Brain Breast Heart Kidney Lung Ovary Testis
ENST00000379344 0.218±0.00 0.677±0.00 1.110±0.00 0.125±0.00 0.419±0.00 0.094±0.00 1.550±0.41 18.962±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005JZ CIL_0005JZ_0002 CGP 16:67237683-67289499
CIL_00033E CIL_00033E_0001 CGP 16:67277510-67326763

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005089 IEA Rho guanyl-nucleotide exchange factor activity
GO:0032321 IEA positive regulation of Rho GTPase activity
GO:0035023 IEA regulation of Rho protein signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000014927 Plekhg4-001 protein_coding Mus_musculus 0 2619
ENSMUST00000160191 Plekhg4-007 protein_coding Mus_musculus 0 2494
ENSMUST00000159286 Plekhg4-002 nonsense_mediated_decay Mus_musculus 0 1886
ENSMUST00000161672 Plekhg4-003 retained_intron Mus_musculus 0 560
ENSDART00000154669 PLEKHG4B (2 of 2)-001 protein_coding Danio_rerio 2e-36 159
ENSDART00000128140 PLEKHG4B (2 of 2)-201 protein_coding Danio_rerio 6e-26 124

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