C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: endothelin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000379375 EDN1-001 ENSG00000078401 9606 + 6:12290363-12297194 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000379375
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000379375 6.832±0.00 6.472±0.00 0.947±0.00 6.555±5.96 2.943±0.80 2.813±1.16 0.849±0.78 2.326±2.31 0.416±0.24 9.034±0.95 1.203±0.97 3.534±2.90 5.919±0.76 6.619±3.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008Y7 CIL_0008Y7_0001 VISTA 6:11945112-12546099
CIL_00037V CIL_00037V_0001 CGP 6:12008762-12297194
CIL_0003IC CIL_0003IC_0001 CGP 6:12290363-13290484

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0001501 IEA skeletal system development
GO:0001516 IDA prostaglandin biosynthetic process
GO:0001569 IEA patterning of blood vessels
GO:0001666 IEA response to hypoxia
GO:0001701 IEA in utero embryonic development
GO:0001821 IEA histamine secretion
GO:0003100 IDA regulation of systemic arterial blood pressure by endothelin
GO:0005102 IEA receptor binding
GO:0005125 IDA cytokine activity
GO:0005179 IDA hormone activity
GO:0005515 IPI protein binding
GO:0005576 TAS:IEA extracellular region
GO:0005615 IDA extracellular space
GO:0005737 IDA cytoplasm
GO:0006885 IEA regulation of pH
GO:0007166 IDA cell surface receptor signaling pathway
GO:0007186 IDA G-protein coupled receptor signaling pathway
GO:0007204 IDA positive regulation of cytosolic calcium ion concentration
GO:0007205 IEA protein kinase C-activating G-protein coupled receptor signaling pathway
GO:0007267 IDA cell-cell signaling
GO:0007507 IEA heart development
GO:0007585 IEA respiratory gaseous exchange
GO:0007589 IEA body fluid secretion
GO:0008217 IEA regulation of blood pressure
GO:0008284 IDA positive regulation of cell proliferation
GO:0009953 IEA dorsal/ventral pattern formation
GO:0010193 IEA response to ozone
GO:0010259 IEA multicellular organismal aging
GO:0010460 IDA positive regulation of heart rate
GO:0010595 TAS positive regulation of endothelial cell migration
GO:0010613 IDA positive regulation of cardiac muscle hypertrophy
GO:0010870 IDA positive regulation of receptor biosynthetic process
GO:0014032 IEA neural crest cell development
GO:0014065 IDA phosphatidylinositol 3-kinase signaling
GO:0014823 IEA response to activity
GO:0014824 TAS artery smooth muscle contraction
GO:0014826 IDA vein smooth muscle contraction
GO:0015758 IEA glucose transport
GO:0016049 IEA cell growth
GO:0019229 IEA regulation of vasoconstriction
GO:0019233 IEA sensory perception of pain
GO:0019722 IDA calcium-mediated signaling
GO:0030072 IDA peptide hormone secretion
GO:0030185 IDA nitric oxide transport
GO:0030195 TAS negative regulation of blood coagulation
GO:0030335 IDA positive regulation of cell migration
GO:0030818 IEA negative regulation of cAMP biosynthetic process
GO:0031583 IEA phospholipase D-activating G-protein coupled receptor signaling pathway
GO:0031707 IDA endothelin A receptor binding
GO:0031708 IDA endothelin B receptor binding
GO:0032269 IDA negative regulation of cellular protein metabolic process
GO:0032308 IEA positive regulation of prostaglandin secretion
GO:0032496 IEA response to lipopolysaccharide
GO:0033093 IEA Weibel-Palade body
GO:0033574 IEA response to testosterone
GO:0034392 IEA negative regulation of smooth muscle cell apoptotic process
GO:0034696 IEA response to prostaglandin F
GO:0035094 IEA response to nicotine
GO:0035556 IEA intracellular signal transduction
GO:0035690 IEA cellular response to drug
GO:0035810 IEA positive regulation of urine volume
GO:0035815 IEA positive regulation of renal sodium excretion
GO:0035994 IEA response to muscle stretch
GO:0042045 IEA epithelial fluid transport
GO:0042310 IDA vasoconstriction
GO:0042313 IDA protein kinase C deactivation
GO:0042474 IEA middle ear morphogenesis
GO:0042482 IEA positive regulation of odontogenesis
GO:0042493 IEA response to drug
GO:0042554 IEA superoxide anion generation
GO:0043179 IEA rhythmic excitation
GO:0043200 IEA response to amino acid
GO:0043406 IDA positive regulation of MAP kinase activity
GO:0043507 IDA positive regulation of JUN kinase activity
GO:0044321 IEA response to leptin
GO:0045178 IEA basal part of cell
GO:0045321 TAS leukocyte activation
GO:0045429 TAS positive regulation of nitric oxide biosynthetic process
GO:0045793 IDA positive regulation of cell size
GO:0045840 IDA positive regulation of mitosis
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter
GO:0045987 IEA positive regulation of smooth muscle contraction
GO:0046887 IDA positive regulation of hormone secretion
GO:0046888 IEA negative regulation of hormone secretion
GO:0048016 IDA inositol phosphate-mediated signaling
GO:0048237 IEA rough endoplasmic reticulum lumen
GO:0048514 IEA blood vessel morphogenesis
GO:0048661 IDA positive regulation of smooth muscle cell proliferation
GO:0051216 IEA cartilage development
GO:0051482 IEA positive regulation of cytosolic calcium ion concentration involved in phospholipase C-activating G-protein coupled signaling pathway
GO:0051771 IDA negative regulation of nitric-oxide synthase biosynthetic process
GO:0051899 IEA membrane depolarization
GO:0051930 IEA regulation of sensory perception of pain
GO:0060137 IEA maternal process involved in parturition
GO:0060298 IMP positive regulation of sarcomere organization
GO:0060585 IMP positive regulation of prostaglandin-endoperoxide synthase activity
GO:0070101 IC positive regulation of chemokine-mediated signaling pathway
GO:0071277 IEA cellular response to calcium ion
GO:0071346 IEA cellular response to interferon-gamma
GO:0071347 IEA cellular response to interleukin-1
GO:0071356 IEA cellular response to tumor necrosis factor
GO:0071375 IEA cellular response to peptide hormone stimulus
GO:0071385 IEA cellular response to glucocorticoid stimulus
GO:0071389 IEA cellular response to mineralocorticoid stimulus
GO:0071398 IEA cellular response to fatty acid
GO:0071456 IEA cellular response to hypoxia
GO:0071548 IEA response to dexamethasone
GO:0071559 IEA response to transforming growth factor beta
GO:0071560 IEA cellular response to transforming growth factor beta stimulus
GO:0090023 IEA positive regulation of neutrophil chemotaxis
GO:1902074 IEA response to salt

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021796 Edn1-201 protein_coding Mus_musculus 0 643

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