C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphodiesterase 7A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000379419 PDE7A-003 ENSG00000205268 9606 - 8:65718379-65789084 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderMuscleOvaryPlacentaTestisENST00000379419
Transcript ID Bladder Muscle Ovary Placenta Testis
ENST00000379419 1.853±0.00 2.411±0.00 2.141±0.00 5.524±0.00 8.943±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005LS CIL_0005LS_0002 CGP 8:65602456-65771261
CIL_0005LR CIL_0005LR_0002 CGP 8:65644734-65842322
CIL_0007EF CIL_0007EF_0002 CGP 8:65717510-66100526

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004114 IEA 3',5'-cyclic-nucleotide phosphodiesterase activity
GO:0004115 TAS 3',5'-cyclic-AMP phosphodiesterase activity
GO:0005829 TAS cytosol
GO:0006198 IEA cAMP catabolic process
GO:0007165 IEA signal transduction
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000091314 Pde7a-002 protein_coding Mus_musculus 0 2270
ENSMUST00000099195 Pde7a-001 protein_coding Mus_musculus 0 2170
ENSMUST00000149081 Pde7a-007 nonsense_mediated_decay Mus_musculus 0 809
ENSMUST00000139426 Pde7a-008 processed_transcript Mus_musculus 0 691
ENSMUST00000148590 Pde7a-010 retained_intron Mus_musculus 0 636
ENSMUST00000141621 Pde7a-009 retained_intron Mus_musculus 0 525
ENSMUST00000156652 Pde7a-003 nonsense_mediated_decay Mus_musculus 0 427
ENSMUST00000121951 Pde7a-006 protein_coding Mus_musculus 0 294
ENSMUST00000129060 Pde7a-004 retained_intron Mus_musculus 0 195
ENSMUST00000143120 Pde7a-005 processed_transcript Mus_musculus 1.99965e-42 178

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