C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: elongator acetyltransferase complex subunit 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000380353 ELP3-201 ENSG00000134014 9606 + 8:28093067-28191150 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonLiverLungMuscleOvaryPlacentaTestisENST00000380353
Transcript ID Brain Colon Liver Lung Muscle Ovary Placenta Testis
ENST00000380353 2.355±0.00 1.183±0.00 2.562±0.00 1.578±0.00 0.786±0.00 1.065±0.00 1.734±0.28 2.139±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009DK CIL_0009DK_0001 VISTA 8:27594923-28195834

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IDA DNA binding
GO:0003824 IEA catalytic activity
GO:0004402 IEA histone acetyltransferase activity
GO:0005515 IPI protein binding
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0006325 TAS chromatin organization
GO:0006357 TAS regulation of transcription from RNA polymerase II promoter
GO:0006368 IDA transcription elongation from RNA polymerase II promoter
GO:0008023 IDA transcription elongation factor complex
GO:0008080 IEA N-acetyltransferase activity
GO:0008607 IDA phosphorylase kinase regulator activity
GO:0016573 IEA histone acetylation
GO:0016591 IDA DNA-directed RNA polymerase II, holoenzyme
GO:0030335 ISS positive regulation of cell migration
GO:0033588 IDA Elongator holoenzyme complex
GO:0045859 IDA regulation of protein kinase activity
GO:0046872 IEA metal ion binding
GO:0051536 IEA iron-sulfur cluster binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000022609 Elp3-201 protein_coding Mus_musculus 0 1681
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.000004 58

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