C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: centlein, centrosomal protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000380641 CNTLN-004 ENSG00000044459 9606 + 9:17135040-17302051 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000380641
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000380641 0.895±0.00 1.255±0.00 1.493±0.00 0.415±0.15 0.963±0.35 0.566±0.28 0.346±0.02 1.682±1.25 1.027±0.44 0.875±0.56 0.181±0.01 0.628±0.33 0.516±0.21 1.792±0.78

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007PP CIL_0007PP_0001 UCNEbase 9:15728012-17487698
CIL_000148 CIL_000148_0001 CGP 9:16409503-17503923
CIL_0008E9 CIL_0008E9_0001 VISTA 9:17022202-17624373
CIL_0007VQ CIL_0007VQ_0001 VISTA 9:17031973-17632582
CIL_00013X CIL_00013X_0001 CGP 9:17134982-17797129

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000155 IEA phosphorelay sensor kinase activity
GO:0000160 IEA phosphorelay signal transduction system
GO:0005737 IDA cytoplasm
GO:0005814 IDA centriole
GO:0010457 IMP centriole-centriole cohesion
GO:0016020 IEA membrane
GO:0019901 IPI protein kinase binding
GO:0019904 IPI protein domain specific binding
GO:0023014 IEA signal transduction by phosphorylation
GO:0030674 IMP protein binding, bridging
GO:0033365 IMP protein localization to organelle
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000047023 Cntln-001 protein_coding Mus_musculus 0 1002
ENSMUST00000169371 Cntln-201 protein_coding Mus_musculus 0 970
ENSMUST00000102819 Cntln-003 protein_coding Mus_musculus 0 763

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