C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: centlein, centrosomal protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000380647 CNTLN-001 ENSG00000044459 9606 + 9:17134982-17503923 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartLiverLungOvaryPlacentaTestisENST00000380647
Transcript ID Adipose Bladder Brain Breast Colon Heart Liver Lung Ovary Placenta Testis
ENST00000380647 0.971±0.00 0.206±0.00 0.330±0.08 0.945±0.36 1.182±0.80 0.520±0.00 0.523±0.04 1.042±0.71 1.815±0.51 0.584±0.49 1.487±0.78

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007PP CIL_0007PP_0001 UCNEbase 9:15728012-17487698
CIL_000148 CIL_000148_0001 CGP 9:16409503-17503923
CIL_0008E9 CIL_0008E9_0001 VISTA 9:17022202-17624373
CIL_0007VQ CIL_0007VQ_0001 VISTA 9:17031973-17632582
CIL_00013X CIL_00013X_0001 CGP 9:17134982-17797129

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000155 IEA phosphorelay sensor kinase activity
GO:0000160 IEA phosphorelay signal transduction system
GO:0005737 IDA cytoplasm
GO:0005814 IDA centriole
GO:0010457 IMP centriole-centriole cohesion
GO:0016020 IEA membrane
GO:0019901 IPI protein kinase binding
GO:0019904 IPI protein domain specific binding
GO:0023014 IEA signal transduction by phosphorylation
GO:0030674 IMP protein binding, bridging
GO:0033365 IMP protein localization to organelle
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000047023 Cntln-001 protein_coding Mus_musculus 0 3685
ENSMUST00000169371 Cntln-201 protein_coding Mus_musculus 0 3603
ENSMUST00000107190 Cntln-002 protein_coding Mus_musculus 0 856
ENSMUST00000102819 Cntln-003 protein_coding Mus_musculus 0 793

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