C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger, DHHC-type containing 21
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000380916 ZDHHC21-001 ENSG00000175893 9606 - 9:14611071-14693471 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000380916
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000380916 0.357±0.00 0.691±0.00 2.122±0.22 1.100±0.17 0.769±0.00 0.810±0.00 1.004±0.00 0.650±0.31 2.143±1.26 0.366±0.00 0.579±0.21 0.564±0.12 1.799±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000143 CIL_000143_0001 CGP 9:14081843-14693471
CIL_000943 CIL_000943_0001 VISTA 9:14449160-15052146
CIL_000144 CIL_000144_0001 CGP 9:14611071-14722717

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0001942 IEA hair follicle development
GO:0005794 IDA Golgi apparatus
GO:0005886 IDA plasma membrane
GO:0008270 IEA zinc ion binding
GO:0016021 IEA integral component of membrane
GO:0016409 IDA palmitoyltransferase activity
GO:0018230 IMP peptidyl-L-cysteine S-palmitoylation
GO:0018345 IDA protein palmitoylation
GO:0019706 IEA protein-cysteine S-palmitoyltransferase activity
GO:0044281 TAS small molecule metabolic process
GO:0046209 TAS nitric oxide metabolic process
GO:0048733 IEA sebaceous gland development
GO:0050999 TAS regulation of nitric-oxide synthase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030110 Zdhhc21-001 protein_coding Mus_musculus 0 1709
ENSMUST00000107239 Zdhhc21-004 protein_coding Mus_musculus 0 1386
ENSMUST00000173741 Zdhhc21-006 nonsense_mediated_decay Mus_musculus 0 955
ENSMUST00000144139 Zdhhc21-005 retained_intron Mus_musculus 0 462
ENSMUST00000139401 Zdhhc21-003 protein_coding Mus_musculus 0 451

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