C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cation channel, sperm associated 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000381761 CATSPER2-004 ENSG00000166762 9606 - 15:43630562-43648848 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WI CIL_0007WI_0001 VISTA 15:43579049-44181693
CIL_000682 CIL_000682_0001 CGP 15:43599398-43668118

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0005227 IEA calcium activated cation channel activity
GO:0005244 IEA voltage-gated ion channel activity
GO:0006811 IEA ion transport
GO:0016020 IEA membrane
GO:0030317 IEA sperm motility
GO:0034765 IEA regulation of ion transmembrane transport
GO:0036128 IEA CatSper complex
GO:0055085 IEA transmembrane transport
GO:0098655 IEA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000038073 Catsper2-001 protein_coding Mus_musculus 0 976
ENSMUST00000146521 Catsper2-004 retained_intron Mus_musculus 0 250
ENSMUST00000154604 Catsper2-002 nonsense_mediated_decay Mus_musculus 0 250

Loading