C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cation channel, sperm associated 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000154604 Catsper2-002 ENSMUSG00000033486 10090 - 2:121392631-121413609 nonsense_mediated_decay

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WI CIL_0007WI_0002 VISTA 2:121250003-121852600
CIL_000682 CIL_000682_0002 CGP 2:121363728-121413792

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005227 IEA calcium activated cation channel activity
GO:0005245 IBA voltage-gated calcium channel activity
GO:0009566 IMP fertilization
GO:0030317 IMP sperm motility
GO:0036126 IDA sperm flagellum
GO:0036128 IEA CatSper complex
GO:0048240 IMP sperm capacitation
GO:0070509 IBA calcium ion import
GO:0070588 IBA calcium ion transmembrane transport
GO:0086010 IBA membrane depolarization during action potential

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000098759 setd8a-201 protein_coding Danio_rerio 0.0001 53
ENST00000321596 CATSPER2-002 protein_coding Homo_sapiens 0 231
ENST00000381761 CATSPER2-004 protein_coding Homo_sapiens 0 250
ENST00000396879 CATSPER2-001 protein_coding Homo_sapiens 0 250
ENST00000419262 CATSPER2-008 nonsense_mediated_decay Homo_sapiens 0 202
ENST00000433380 CATSPER2-003 nonsense_mediated_decay Homo_sapiens 0 250
ENST00000439564 CATSPER2P1-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 219
ENST00000446479 CATSPER2P1-005 processed_transcript Homo_sapiens 0 206
ENST00000450810 CATSPER2-013 nonsense_mediated_decay Homo_sapiens 0 202
ENST00000469461 CATSPER2-006 retained_intron Homo_sapiens 0 250

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