C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: keratin associated protein 5-6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000382160 KRTAP5-6-001 ENSG00000205864 9606 + 11:1697195-1697755 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverENST00000382160
Transcript ID Liver
ENST00000382160 0.041±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008MR CIL_0008MR_0001 VISTA 11:1663842-2266142
CIL_0007RG CIL_0007RG_0001 VISTA 11:1668349-2271510
CIL_00097V CIL_00097V_0001 VISTA 11:1688064-2293510

Gene Ontology

GO IDEvidence TypeGO Description
GO:0045095 IEA keratin filament

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000061403 Krtap5-4-201 protein_coding Mus_musculus 2e-28 130
ENSMUST00000067978 Krtap5-2-201 protein_coding Mus_musculus 2e-18 97
ENSMUST00000190456 Krtap5-2-001 protein_coding Mus_musculus 2e-18 97
ENSMUST00000097943 Gm7579-001 unprocessed_pseudogene Mus_musculus 3e-16 90
ENSMUST00000106074 Gm10013-001 unprocessed_pseudogene Mus_musculus 0.000000000002 77
ENSMUST00000188274 Krtap5-1-001 protein_coding Mus_musculus 0.0000000003 69

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