C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: regulator of G-protein signaling 12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000382788 RGS12-002 ENSG00000159788 9606 + 4:3316068-3432250 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000382788
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000382788 2.257±0.00 1.170±0.00 0.772±0.00 1.950±0.87 1.723±0.99 1.757±1.37 0.655±0.43 0.527±0.00 0.646±0.00 4.198±0.00 1.508±1.18 3.204±2.48 2.265±0.70 5.235±0.35

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003Z3 CIL_0003Z3_0001 CGP 4:3244369-3439913
CIL_0001XB CIL_0001XB_0001 CGP 4:3293028-3449495

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000794 TAS condensed nuclear chromosome
GO:0005057 IEA receptor signaling protein activity
GO:0005096 IBA GTPase activator activity
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0005737 IDA:IBA cytoplasm
GO:0005886 IBA plasma membrane
GO:0006351 IEA transcription, DNA-templated
GO:0007165 IEA signal transduction
GO:0008277 TAS:IEA regulation of G-protein coupled receptor protein signaling pathway
GO:0030695 IDA:IEA GTPase regulator activity
GO:0035556 IEA intracellular signal transduction
GO:0038032 IEA termination of G-protein coupled receptor signaling pathway
GO:0043547 IBA positive regulation of GTPase activity
GO:0050790 IDA regulation of catalytic activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000087684 Rgs12-005 protein_coding Mus_musculus 0 3493
ENSMUST00000030984 Rgs12-001 protein_coding Mus_musculus 0 3493
ENSMUST00000114283 Rgs12-006 protein_coding Mus_musculus 0 1929
ENSMUST00000114281 Rgs12-002 protein_coding Mus_musculus 0 1929
ENSMUST00000114285 Rgs12-008 protein_coding Mus_musculus 0 1929
ENSMUST00000114284 Rgs12-003 protein_coding Mus_musculus 0 1929
ENSMUST00000128161 Rgs12-004 retained_intron Mus_musculus 0 1807
ENSMUST00000114280 Rgs12-007 protein_coding Mus_musculus 0 1496
ENSMUST00000156339 Rgs12-015 protein_coding Mus_musculus 0 863
ENSMUST00000155162 Rgs12-012 processed_transcript Mus_musculus 0 580
ENSMUST00000156819 Rgs12-013 protein_coding Mus_musculus 0 520
ENSMUST00000141562 Rgs12-010 retained_intron Mus_musculus 0 364
ENSMUST00000153972 Rgs12-009 processed_transcript Mus_musculus 0 320
ENSDART00000125886 rgs12b-202 protein_coding Danio_rerio 0 220
ENSDART00000101536 rgs12b-201 protein_coding Danio_rerio 0 220
ENSDART00000125988 rgs12b-003 protein_coding Danio_rerio 0 220
ENSDART00000126853 rgs12b-002 protein_coding Danio_rerio 0 220
ENSDART00000022546 rgs12b-001 protein_coding Danio_rerio 0 220

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