C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 129, E3 ubiquitin protein ligase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000382936 TMEM129-002 ENSG00000168936 9606 - 4:1715953-1721331 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000382936
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000382936 6.414±0.00 2.625±0.79 4.673±4.58 5.527±0.00 1.856±0.00 16.715±0.00 12.453±0.00 4.815±0.00 9.801±3.72 11.148±1.96 4.607±0.61

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007TX CIL_0007TX_0001 VISTA 4:1311752-1912379
CIL_0006V4 CIL_0006V4_0001 CGP 4:1692800-1721358
CIL_0003K0 CIL_0003K0_0001 CGP 4:1715952-1745176

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005783 IEA endoplasmic reticulum
GO:0006986 IEA response to unfolded protein
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000019439 Tmem129-001 protein_coding Mus_musculus 0 1092
ENSMUST00000125527 Tmem129-003 nonsense_mediated_decay Mus_musculus 0 237
ENSMUST00000140931 Tmem129-002 nonsense_mediated_decay Mus_musculus 0 237

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