C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003K0_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000168936-ENSG00000013810 CGP 9606 4:1715952-1745176
GeneTranscriptPositionBiotype
ENSG00000013810 (TACC3)
transforming, acidic coiled-coil containing protein 3 		ENST00000313288 (TACC3-001) 1721539-1745171 protein_coding
ENST00000404054 (TACC3-012) 1739351-1742121 retained_intron
ENST00000458173 (TACC3-011) 1723110-1728066 protein_coding
ENST00000466077 (TACC3-007) 1730803-1737645 retained_intron
ENST00000467746 (TACC3-004) 1721535-1728232 nonsense_mediated_decay
ENST00000470136 (TACC3-006) 1728404-1735827 protein_coding
ENST00000470808 (TACC3-008) 1739345-1741294 retained_intron
ENST00000484264 (TACC3-009) 1744439-1745076 retained_intron
ENST00000484651 (TACC3-002) 1721519-1738350 retained_intron
ENST00000485989 (TACC3-003) 1721500-1735747 protein_coding
ENST00000493975 (TACC3-005) 1721785-1728094 protein_coding
ENST00000612220 (TACC3-201) 1721490-1745176 protein_coding
ENST00000617535 (TACC3-202) 1721545-1745168 protein_coding
ENSG00000168936 (TMEM129)
transmembrane protein 129, E3 ubiquitin protein ligase 		ENST00000303277 (TMEM129-001) 1715952-1721358 protein_coding
ENST00000382936 (TMEM129-002) 1715953-1721331 protein_coding
ENST00000460722 (TMEM129-003) 1716601-1718235 nonsense_mediated_decay
ENST00000476253 (TMEM129-004) 1716865-1717909 retained_intron
ENST00000480360 (TMEM129-005) 1718385-1720781 nonsense_mediated_decay
ENST00000536901 (TMEM129-201) 1716507-1721331 protein_coding
CIL_0003K0_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000019295-ENSMUSG00000037313 CGP 10090 5:33653216-33678995
GeneTranscriptPositionBiotype
ENSMUSG00000019295 (Tmem129)
transmembrane protein 129 		ENSMUST00000019439 (Tmem129-001) 33653216-33657977 protein_coding
ENSMUST00000125527 (Tmem129-003) 33655558-33657856 nonsense_mediated_decay
ENSMUST00000140931 (Tmem129-002) 33653219-33657899 nonsense_mediated_decay
ENSMUSG00000037313 (Tacc3)
transforming, acidic coiled-coil containing protein 3 		ENSMUST00000074849 (Tacc3-001) 33658128-33672201 protein_coding
ENSMUST00000079534 (Tacc3-003) 33658128-33678995 protein_coding
ENSMUST00000114426 (Tacc3-002) 33658586-33672193 protein_coding
ENSMUST00000138240 (Tacc3-005) 33669569-33672201 protein_coding
ENSMUST00000139453 (Tacc3-007) 33658634-33662015 retained_intron
ENSMUST00000139888 (Tacc3-004) 33668724-33678985 protein_coding
ENSMUST00000152847 (Tacc3-006) 33658554-33664283 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003K0_0001ENSG00000013810ENST00000313288ENST00000404054ENST00000458173ENST00000466077ENST00000467746ENST00000470136ENST00000470808ENST00000484264ENST00000484651ENST00000485989ENST00000493975ENST00000612220ENST00000617535ENSG00000168936ENST00000303277ENST00000382936ENST00000460722ENST00000476253ENST00000480360ENST00000536901CIL_0003K0_0002ENSMUSG00000019295ENSMUST00000019439ENSMUST00000125527ENSMUST00000140931ENSMUSG00000037313ENSMUST00000074849ENSMUST00000079534ENSMUST00000114426ENSMUST00000138240ENSMUST00000139453ENSMUST00000139888ENSMUST00000152847
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003K0_0001ENSG00000013810ENST00000313288ENST00000404054ENST00000458173ENST00000467746ENST00000470136ENST00000470808ENST00000484264ENST00000484651ENST00000485989ENST00000493975ENST00000617535ENSG00000168936ENST00000303277ENST00000382936ENST00000480360ENST00000536901CIL_0003K0_0002ENSMUSG00000019295ENSMUST00000019439ENSMUST00000125527ENSMUST00000140931ENSMUSG00000037313ENSMUST00000074849ENSMUST00000079534ENSMUST00000114426ENSMUST00000138240ENSMUST00000139888
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000013810 ENST00000313288 0.992±0.00 4.584±0.00 N/A 0.434±0.00 0.998±0.00 0.442±0.00 0.603±0.00 N/A N/A 0.345±0.10 N/A 6.110±5.94 10.702±2.40 40.844±19.36
ENST00000404054 N/A N/A N/A N/A N/A N/A N/A 0.207±0.00 0.150±0.00 0.568±0.00 0.044±0.00 N/A N/A N/A
ENST00000458173 N/A N/A N/A 0.217±0.00 1.169±0.00 N/A N/A 1.212±0.00 0.268±0.00 1.065±0.00 N/A 1.155±0.00 N/A N/A
ENST00000466077 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467746 N/A N/A 0.915±0.00 N/A N/A N/A N/A 0.291±0.00 N/A N/A N/A N/A N/A N/A
ENST00000470136 N/A N/A N/A 0.238±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470808 N/A N/A N/A N/A N/A N/A N/A N/A 0.336±0.00 N/A N/A 0.514±0.00 N/A N/A
ENST00000484264 3.773±0.00 12.486±0.00 0.573±0.00 N/A 2.283±0.00 2.471±0.00 1.481±0.00 2.015±0.00 0.247±0.00 3.134±0.00 0.392±0.00 N/A N/A N/A
ENST00000484651 N/A N/A N/A N/A N/A N/A 0.249±0.00 0.187±0.00 N/A N/A N/A 0.248±0.00 N/A N/A
ENST00000485989 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.190±0.00 N/A N/A N/A
ENST00000493975 N/A N/A N/A N/A N/A 1.498±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000612220 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000617535 N/A N/A N/A 0.125±0.00 N/A N/A N/A N/A N/A N/A 0.059±0.00 2.245±0.00 N/A N/A
ENSG00000168936 ENST00000303277 N/A N/A N/A N/A N/A N/A 4.646±0.00 N/A N/A 0.212±0.00 1.433±0.00 0.271±0.00 N/A 3.395±0.52
ENST00000382936 6.414±0.00 N/A N/A 2.625±0.79 4.673±4.58 5.527±0.00 1.856±0.00 16.715±0.00 12.453±0.00 4.815±0.00 N/A 9.801±3.72 11.148±1.96 4.607±0.61
ENST00000460722 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476253 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480360 N/A N/A N/A 1.377±0.00 N/A 2.247±0.00 1.536±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000536901 N/A N/A 0.975±0.00 N/A 0.394±0.00 N/A 2.934±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000019295 ENSMUST00000019439 17.018±0.77 36.424±6.76 12.699±3.03 11.616±2.00 22.519±8.52 29.007±6.40 14.811±1.41 18.158±2.41 15.837±2.88 17.671±2.45 2.733±0.96 24.512±11.06 10.567±6.23 19.470±9.61
ENSMUST00000125527 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.485±0.00 N/A 2.861±0.00
ENSMUST00000140931 3.061±0.38 6.695±0.59 2.252±0.00 1.166±0.08 5.761±0.00 7.801±1.69 N/A 3.230±0.25 2.870±0.51 3.163±0.51 0.791±0.40 5.058±1.82 2.411±0.46 1.640±1.25
ENSMUSG00000037313 ENSMUST00000074849 0.816±0.05 1.052±0.13 0.675±0.00 1.564±0.44 1.378±0.03 1.737±0.00 0.246±0.25 0.456±0.16 2.368±3.13 0.747±0.30 0.372±0.17 1.239±0.37 N/A 8.528±1.12
ENSMUST00000079534 0.250±0.00 0.312±0.11 0.375±0.00 N/A N/A N/A N/A 0.165±0.00 0.132±0.00 0.673±0.00 0.249±0.00 N/A N/A 1.934±0.11
ENSMUST00000114426 3.309±2.43 N/A 2.261±0.13 13.557±2.72 1.175±0.22 3.856±0.00 0.415±0.09 0.439±0.17 25.807±24.73 1.050±0.39 0.385±0.19 10.923±3.92 29.436±20.93 15.566±10.56
ENSMUST00000138240 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 17.323±0.00 7.000±0.00 N/A
ENSMUST00000139453 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139888 N/A N/A N/A 2.996±0.00 N/A N/A N/A N/A N/A N/A N/A 13.521±0.00 27.192±23.96 26.439±0.00
ENSMUST00000152847 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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