C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006V4_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000163950-ENSG00000168936 CGP 9606 4:1692800-1721358
GeneTranscriptPositionBiotype
ENSG00000163950 (SLBP)
stem-loop binding protein 		ENST00000318386 (SLBP-004) 1692858-1712250 protein_coding
ENST00000429429 (SLBP-002) 1692800-1712318 protein_coding
ENST00000480936 (SLBP-006) 1696295-1712344 protein_coding
ENST00000483348 (SLBP-007) 1693244-1712018 protein_coding
ENST00000488267 (SLBP-003) 1693447-1712317 protein_coding
ENST00000489418 (SLBP-001) 1692800-1712555 protein_coding
ENSG00000168936 (TMEM129)
transmembrane protein 129, E3 ubiquitin protein ligase 		ENST00000303277 (TMEM129-001) 1715952-1721358 protein_coding
ENST00000382936 (TMEM129-002) 1715953-1721331 protein_coding
ENST00000460722 (TMEM129-003) 1716601-1718235 nonsense_mediated_decay
ENST00000476253 (TMEM129-004) 1716865-1717909 retained_intron
ENST00000480360 (TMEM129-005) 1718385-1720781 nonsense_mediated_decay
ENST00000536901 (TMEM129-201) 1716507-1721331 protein_coding
ENSG00000270195 (RP11-572O17.1)
 ENST00000605571 (RP11-572O17.1-001) 1712821-1713622 lincRNA
CIL_0006V4_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000004642-ENSMUSG00000019295 CGP 10090 5:33634952-33657977
GeneTranscriptPositionBiotype
ENSMUSG00000004642 (Slbp)
stem-loop binding protein 		ENSMUST00000057551 (Slbp-001) 33640055-33652574 protein_coding
ENSMUST00000075670 (Slbp-003) 33634952-33652345 protein_coding
ENSMUST00000101354 (Slbp-002) 33640055-33652306 protein_coding
ENSMUST00000126581 (Slbp-005) 33651625-33652301 retained_intron
ENSMUST00000139518 (Slbp-009) 33643481-33652300 retained_intron
ENSMUST00000143003 (Slbp-008) 33641941-33645801 retained_intron
ENSMUST00000143029 (Slbp-004) 33648662-33652353 retained_intron
ENSMUST00000146889 (Slbp-010) 33640386-33642162 retained_intron
ENSMUST00000148153 (Slbp-007) 33645628-33652338 retained_intron
ENSMUST00000151081 (Slbp-006) 33645629-33652296 protein_coding
ENSMUSG00000019295 (Tmem129)
transmembrane protein 129 		ENSMUST00000019439 (Tmem129-001) 33653216-33657977 protein_coding
ENSMUST00000125527 (Tmem129-003) 33655558-33657856 nonsense_mediated_decay
ENSMUST00000140931 (Tmem129-002) 33653219-33657899 nonsense_mediated_decay

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006V4_0001ENSG00000163950ENST00000318386ENST00000429429ENST00000480936ENST00000483348ENST00000488267ENST00000489418ENSG00000168936ENST00000303277ENST00000382936ENST00000460722ENST00000476253ENST00000480360ENST00000536901ENSG00000270195ENST00000605571CIL_0006V4_0002ENSMUSG00000004642ENSMUST00000057551ENSMUST00000075670ENSMUST00000101354ENSMUST00000126581ENSMUST00000139518ENSMUST00000143003ENSMUST00000143029ENSMUST00000146889ENSMUST00000148153ENSMUST00000151081ENSMUSG00000019295ENSMUST00000019439ENSMUST00000125527ENSMUST00000140931
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006V4_0001ENSG00000163950ENST00000318386ENST00000429429ENST00000480936ENST00000483348ENST00000488267ENST00000489418ENSG00000168936ENST00000303277ENST00000382936ENST00000480360ENST00000536901ENSG00000270195ENST00000605571CIL_0006V4_0002ENSMUSG00000004642ENSMUST00000057551ENSMUST00000075670ENSMUST00000101354ENSMUST00000126581ENSMUST00000139518ENSMUST00000146889ENSMUST00000148153ENSMUSG00000019295ENSMUST00000019439ENSMUST00000125527ENSMUST00000140931
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000163950 ENST00000318386 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.694±0.00 N/A N/A
ENST00000429429 4.333±0.00 3.856±0.00 0.478±0.00 6.431±0.00 3.098±0.00 3.946±2.32 N/A 0.784±0.00 N/A 0.672±0.00 N/A 4.113±3.25 4.980±1.35 N/A
ENST00000480936 N/A N/A 1.268±0.00 N/A 3.460±0.00 N/A N/A N/A 2.202±0.00 N/A 1.118±0.00 5.809±0.00 N/A N/A
ENST00000483348 N/A N/A N/A N/A N/A N/A 1.663±0.00 N/A 2.175±0.00 4.161±0.00 3.296±0.00 N/A N/A N/A
ENST00000488267 4.395±0.00 N/A N/A 11.682±0.00 5.507±0.00 3.104±2.05 1.357±0.00 8.169±0.00 1.146±0.00 7.034±0.00 N/A 19.178±0.00 31.103±0.00 45.724±0.00
ENST00000489418 4.685±0.00 9.370±0.00 1.067±0.00 2.313±0.00 5.061±3.43 2.820±1.68 1.679±1.55 8.914±6.53 6.403±0.00 4.734±3.11 2.703±1.10 9.701±5.28 17.073±2.88 30.494±0.00
ENSG00000168936 ENST00000303277 N/A N/A N/A N/A N/A N/A 4.646±0.00 N/A N/A 0.212±0.00 1.433±0.00 0.271±0.00 N/A 3.395±0.52
ENST00000382936 6.414±0.00 N/A N/A 2.625±0.79 4.673±4.58 5.527±0.00 1.856±0.00 16.715±0.00 12.453±0.00 4.815±0.00 N/A 9.801±3.72 11.148±1.96 4.607±0.61
ENST00000460722 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476253 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480360 N/A N/A N/A 1.377±0.00 N/A 2.247±0.00 1.536±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000536901 N/A N/A 0.975±0.00 N/A 0.394±0.00 N/A 2.934±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000270195 ENST00000605571 0.164±0.00 1.480±0.00 N/A 0.172±0.00 0.347±0.00 0.206±0.00 0.114±0.05 0.075±0.00 0.063±0.00 0.390±0.19 0.091±0.00 1.180±0.50 0.376±0.14 1.846±1.32
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000004642 ENSMUST00000057551 2.132±0.85 1.972±0.78 11.232±1.62 16.101±8.85 3.645±0.65 2.210±0.00 2.301±0.70 2.872±1.23 59.298±50.51 2.778±0.54 2.456±0.33 8.440±7.28 26.419±10.76 16.078±0.75
ENSMUST00000075670 1.769±0.00 2.993±0.74 N/A N/A 2.362±0.14 4.440±1.00 N/A 2.000±0.63 2.447±0.36 N/A N/A 5.579±0.09 N/A 30.701±7.86
ENSMUST00000101354 2.896±1.08 N/A N/A 4.185±0.97 0.827±0.00 4.767±1.22 1.745±0.74 2.665±1.42 1.734±0.51 4.030±1.24 0.387±0.00 7.505±3.52 20.576±7.84 N/A
ENSMUST00000126581 N/A N/A N/A N/A N/A 3.936±0.00 N/A N/A N/A N/A N/A 12.102±0.00 N/A N/A
ENSMUST00000139518 2.674±0.00 N/A N/A N/A N/A N/A 1.430±0.00 1.717±0.00 0.803±0.00 N/A N/A N/A N/A N/A
ENSMUST00000143003 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143029 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146889 N/A N/A N/A N/A 3.030±1.03 N/A 1.091±0.00 N/A 1.719±0.00 N/A N/A N/A N/A N/A
ENSMUST00000148153 6.467±2.35 20.482±5.56 N/A N/A 24.863±11.89 23.082±8.09 2.237±0.00 6.718±4.87 2.074±0.45 12.647±4.47 N/A 49.999±13.64 N/A N/A
ENSMUST00000151081 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000019295 ENSMUST00000019439 17.018±0.77 36.424±6.76 12.699±3.03 11.616±2.00 22.519±8.52 29.007±6.40 14.811±1.41 18.158±2.41 15.837±2.88 17.671±2.45 2.733±0.96 24.512±11.06 10.567±6.23 19.470±9.61
ENSMUST00000125527 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.485±0.00 N/A 2.861±0.00
ENSMUST00000140931 3.061±0.38 6.695±0.59 2.252±0.00 1.166±0.08 5.761±0.00 7.801±1.69 N/A 3.230±0.25 2.870±0.51 3.163±0.51 0.791±0.40 5.058±1.82 2.411±0.46 1.640±1.25

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