C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: C-terminal binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000382952 CTBP1-003 ENSG00000159692 9606 - 4:1211448-1249112 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000382952
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000382952 18.231±0.00 29.320±0.00 1.518±0.00 12.333±0.00 8.710±0.00 12.213±0.57 13.733±11.21 21.065±0.00 11.302±6.60 13.899±9.65 17.256±14.14 19.121±10.78 23.290±1.65

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006LO CIL_0006LO_0001 CGP 4:1166932-1249953
CIL_0006LN CIL_0006LN_0001 CGP 4:1211448-1340147

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IMP negative regulation of transcription from RNA polymerase II promoter
GO:0001106 IDA RNA polymerase II transcription corepressor activity
GO:0004616 IEA phosphogluconate dehydrogenase (decarboxylating) activity
GO:0005515 IPI protein binding
GO:0005634 ISS nucleus
GO:0006098 IEA pentose-phosphate shunt
GO:0006351 IEA transcription, DNA-templated
GO:0006468 TAS protein phosphorylation
GO:0008022 TAS protein C-terminus binding
GO:0008134 IPI transcription factor binding
GO:0008152 IEA metabolic process
GO:0008285 TAS negative regulation of cell proliferation
GO:0016616 IEA oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0017053 ISS transcriptional repressor complex
GO:0019079 TAS viral genome replication
GO:0019904 IPI protein domain specific binding
GO:0031065 IMP positive regulation of histone deacetylation
GO:0034401 IMP regulation of transcription by chromatin organization
GO:0035067 IMP negative regulation of histone acetylation
GO:0045892 ISS negative regulation of transcription, DNA-templated
GO:0050872 ISS white fat cell differentiation
GO:0051287 IEA:ISS NAD binding
GO:0051726 IMP regulation of cell cycle
GO:0055114 IEA oxidation-reduction process
GO:0070491 IPI repressing transcription factor binding
GO:0090241 IMP negative regulation of histone H4 acetylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000079746 Ctbp1-201 protein_coding Mus_musculus 0 2183
ENSDART00000059796 CTBP1-001 protein_coding Danio_rerio 0 872
ENSDART00000122739 ctbp1-201 protein_coding Danio_rerio 0 656
ENSDART00000079583 ctbp1-001 protein_coding Danio_rerio 0 656
ENSDART00000144367 ctbp1-002 protein_coding Danio_rerio 0 510
ENSDART00000121903 CABZ01109599.1-201 protein_coding Danio_rerio 0 361

Loading