C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: C-terminal binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000079746 Ctbp1-201 ENSMUSG00000037373 10090 - 5:33247724-33275004 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000079746
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000079746 31.040±8.81 80.437±8.27 34.579±16.26 127.369±5.00 35.756±20.52 75.023±11.07 21.737±2.05 26.888±9.63 26.233±19.04 32.408±20.81 15.248±5.06 65.815±23.55 21.386±11.90 6.060±2.24

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006LO CIL_0006LO_0002 CGP 5:33213518-33275004
CIL_0006LN CIL_0006LN_0002 CGP 5:33247724-33373294

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IMP negative regulation of transcription from RNA polymerase II promoter
GO:0001106 IEA RNA polymerase II transcription corepressor activity
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005667 IDA transcription factor complex
GO:0005829 IEA cytosol
GO:0006351 IEA transcription, DNA-templated
GO:0007030 IEA Golgi organization
GO:0008134 IPI transcription factor binding
GO:0016616 IEA oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0017053 IDA transcriptional repressor complex
GO:0019904 IEA protein domain specific binding
GO:0031065 IEA positive regulation of histone deacetylation
GO:0034401 IEA regulation of transcription by chromatin organization
GO:0035067 IEA negative regulation of histone acetylation
GO:0042803 IEA protein homodimerization activity
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0050872 IDA white fat cell differentiation
GO:0051287 ISS NAD binding
GO:0051726 IEA regulation of cell cycle
GO:0055114 IEA oxidation-reduction process
GO:0070491 IEA repressing transcription factor binding
GO:0090241 IEA negative regulation of histone H4 acetylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000121903 CABZ01109599.1-201 protein_coding Danio_rerio 0 305
ENST00000290921 CTBP1-001 protein_coding Homo_sapiens 0 2429
ENST00000309035 CTBP2-006 protein_coding Homo_sapiens 0 747
ENST00000334808 CTBP2-005 protein_coding Homo_sapiens 0 747
ENST00000337195 CTBP2-001 protein_coding Homo_sapiens 0 747
ENST00000382950 CTBP1-014 retained_intron Homo_sapiens 0 532
ENST00000382952 CTBP1-003 protein_coding Homo_sapiens 0 2183
ENST00000395705 CTBP2-015 nonsense_mediated_decay Homo_sapiens 0 243
ENST00000411419 CTBP2-011 protein_coding Homo_sapiens 0 747
ENST00000494626 CTBP2-002 protein_coding Homo_sapiens 0 747
ENST00000503594 CTBP1-015 protein_coding Homo_sapiens 0 1201
ENST00000504092 CTBP1-010 protein_coding Homo_sapiens 0 990
ENST00000506180 CTBP1-005 protein_coding Homo_sapiens 0 614
ENST00000510568 CTBP1-008 protein_coding Homo_sapiens 0 224
ENST00000510739 CTBP1-012 nonsense_mediated_decay Homo_sapiens 0 335
ENST00000513420 CTBP1-002 protein_coding Homo_sapiens 0 496
ENST00000514210 CTBP1-013 protein_coding Homo_sapiens 0 586
ENST00000514596 CTBP1-016 retained_intron Homo_sapiens 0 636
ENST00000515399 CTBP1-006 protein_coding Homo_sapiens 0 586
ENST00000515690 CTBP1-009 processed_transcript Homo_sapiens 0 219
ENST00000531469 CTBP2-003 protein_coding Homo_sapiens 0 747

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