C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: potassium voltage-gated channel, KQT-like subfamily, member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000388996 KCNQ3-001 ENSG00000184156 9606 - 8:132120861-132480953 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainHeartKidneyLiverLungTestisENST00000388996
Transcript ID Adipose Brain Heart Kidney Liver Lung Testis
ENST00000388996 0.063±0.00 3.770±0.69 0.069±0.00 0.115±0.00 0.013±0.00 0.362±0.00 0.044±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006FU CIL_0006FU_0002 CGP 8:132061486-132480953
CIL_0000XM CIL_0000XM_0002 CGP 8:132120859-132675617

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0005249 TAS voltage-gated potassium channel activity
GO:0005251 IBA delayed rectifier potassium channel activity
GO:0005267 TAS:IEA potassium channel activity
GO:0005886 ISS plasma membrane
GO:0006811 IEA ion transport
GO:0006813 TAS potassium ion transport
GO:0007268 TAS synaptic transmission
GO:0007411 TAS axon guidance
GO:0008076 IEA voltage-gated potassium channel complex
GO:0016020 IEA membrane
GO:0033268 ISS node of Ranvier
GO:0034765 IEA regulation of ion transmembrane transport
GO:0043194 ISS axon initial segment
GO:0055085 IEA transmembrane transport
GO:0060081 IEA membrane hyperpolarization
GO:0071805 IEA potassium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000070256 Kcnq3-001 protein_coding Mus_musculus 0 3845
ENSMUST00000183354 Kcnq3-003 processed_transcript Mus_musculus 0 749
ENSMUST00000183633 Kcnq3-002 retained_intron Mus_musculus 0 340

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