| Transcript ID | Bladder | Brain | Heart |
|---|---|---|---|
| ENST00000389645 | 1.851±0.00 | 5.526±0.87 | 3.153±1.47 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | cell cycle associated protein 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000389645  |
CAPRIN1-016 |
ENSG00000135387 |
9606 | + |
11:34051732-34099054  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_000929 | CIL_000929_0001 | VISTA | 11:33642739-34246310 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000932 | ISS | cytoplasmic mRNA processing body |
| GO:0003723 | ISS | RNA binding |
| GO:0005737 | IDA | cytoplasm |
| GO:0005887 | TAS | integral component of plasma membrane |
| GO:0010494 | ISS | cytoplasmic stress granule |
| GO:0016020 | IDA | membrane |
| GO:0017148 | ISS | negative regulation of translation |
| GO:0042995 | IEA | cell projection |
| GO:0044822 | IDA | poly(A) RNA binding |
| GO:0050775 | ISS | positive regulation of dendrite morphogenesis |
| GO:0061003 | ISS | positive regulation of dendritic spine morphogenesis |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000028607
|
Caprin1-001 | protein_coding | Mus_musculus | 0 | 2939 |
|
ENSMUST00000111147
|
Caprin1-002 | protein_coding | Mus_musculus | 0 | 2817 |
|
ENSMUST00000143349
|
Caprin1-016 | protein_coding | Mus_musculus | 0 | 1958 |
|
ENSMUST00000143188
|
Caprin1-008 | protein_coding | Mus_musculus | 0 | 861 |
|
ENSMUST00000141750
|
Caprin1-007 | processed_transcript | Mus_musculus | 0 | 795 |
|
ENSMUST00000145606
|
Caprin1-015 | protein_coding | Mus_musculus | 0 | 769 |
|
ENSMUST00000132537
|
Caprin1-013 | retained_intron | Mus_musculus | 0 | 649 |
|
ENSMUST00000149175
|
Caprin1-014 | retained_intron | Mus_musculus | 0 | 608 |
|
ENSMUST00000145770
|
Caprin1-005 | retained_intron | Mus_musculus | 0 | 534 |
|
ENSMUST00000146527
|
Caprin1-003 | retained_intron | Mus_musculus | 0 | 416 |
|
ENSMUST00000137390
|
Caprin1-012 | retained_intron | Mus_musculus | 0 | 351 |
|
ENSMUST00000145697
|
Caprin1-004 | processed_transcript | Mus_musculus | 0 | 326 |
|
ENSMUST00000128477
|
Caprin1-011 | processed_transcript | Mus_musculus | 0 | 303 |
|
ENSMUST00000155733
|
Caprin1-006 | processed_transcript | Mus_musculus | 0 | 239 |
