C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: laminin, alpha 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000389658 LAMA1-001 ENSG00000101680 9606 - 18:6941744-7117814 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonKidneyOvaryPlacentaTestisENST00000389658
Transcript ID Adipose Brain Breast Colon Kidney Ovary Placenta Testis
ENST00000389658 0.476±0.00 0.136±0.00 0.253±0.00 0.648±0.00 0.776±0.76 0.743±0.05 0.132±0.08 1.421±0.14

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002011 IEA morphogenesis of an epithelial sheet
GO:0005102 IEA receptor binding
GO:0005201 ISS extracellular matrix structural constituent
GO:0005515 IPI:IEA protein binding
GO:0005576 TAS extracellular region
GO:0005578 ISS proteinaceous extracellular matrix
GO:0005604 IDA basement membrane
GO:0005606 IPI:IEA laminin-1 complex
GO:0005608 IPI laminin-3 complex
GO:0005615 IDA extracellular space
GO:0005911 IEA cell-cell junction
GO:0007155 IEA cell adhesion
GO:0007166 ISS cell surface receptor signaling pathway
GO:0007411 TAS axon guidance
GO:0009888 IEA tissue development
GO:0030155 IEA regulation of cell adhesion
GO:0030198 TAS extracellular matrix organization
GO:0030334 IEA regulation of cell migration
GO:0031012 IDA extracellular matrix
GO:0031175 IEA neuron projection development
GO:0043208 IEA glycosphingolipid binding
GO:0043256 IEA laminin complex
GO:0045198 IEA establishment of epithelial cell apical/basal polarity
GO:0045995 IEA regulation of embryonic development
GO:0060041 IEA retina development in camera-type eye
GO:0060441 IEA epithelial tube branching involved in lung morphogenesis
GO:0060445 IEA branching involved in salivary gland morphogenesis
GO:0061304 IEA retinal blood vessel morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000035471 Lama1-201 protein_coding Mus_musculus 0 6253

Loading