C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: synaptotagmin-like 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000389960 SYTL2-202 ENSG00000137501 9606 - 11:85694224-85811159 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalLiverMuscleOvaryPlacentaTestisENST00000389960
Transcript ID Adipose Adrenal Liver Muscle Ovary Placenta Testis
ENST00000389960 0.846±0.00 1.471±0.00 1.647±0.00 0.246±0.00 1.452±0.39 0.955±0.13 1.329±0.02

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001786 IMP phosphatidylserine binding
GO:0005215 IEA transporter activity
GO:0005515 IPI:IEA protein binding
GO:0005546 IMP phosphatidylinositol-4,5-bisphosphate binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005794 IDA Golgi apparatus
GO:0005886 IDA plasma membrane
GO:0006886 IEA intracellular protein transport
GO:0006887 IEA:IDA exocytosis
GO:0006904 IDA vesicle docking involved in exocytosis
GO:0008021 IEA synaptic vesicle
GO:0010923 IDA negative regulation of phosphatase activity
GO:0016020 IEA:ISS membrane
GO:0016192 ISS vesicle-mediated transport
GO:0017137 IEA Rab GTPase binding
GO:0019897 ISS extrinsic component of plasma membrane
GO:0019902 IDA phosphatase binding
GO:0042043 ISS neurexin family protein binding
GO:0042470 ISS melanosome
GO:0070382 IDA exocytic vesicle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000107210 Sytl2-004 protein_coding Mus_musculus 0 2767
ENSMUST00000190731 Sytl2-003 protein_coding Mus_musculus 0 1565
ENSMUST00000107211 Sytl2-002 protein_coding Mus_musculus 0 1411
ENSMUST00000190365 Sytl2-005 processed_transcript Mus_musculus 0 1328
ENSMUST00000098310 Sytl2-006 processed_transcript Mus_musculus 0 1205
ENSMUST00000190837 Sytl2-001 protein_coding Mus_musculus 0 1205
ENSMUST00000189194 Sytl2-007 processed_transcript Mus_musculus 0 1026

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