C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: villin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000392114 VIL1-002 ENSG00000127831 9606 + 2:218419123-218449524 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderColonKidneyLiverOvaryENST00000392114
Transcript ID Bladder Colon Kidney Liver Ovary
ENST00000392114 1.520±0.00 8.325±3.37 3.539±0.43 4.471±0.00 10.751±3.95

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000650 CIL_000650_0001 CGP 2:218398256-218453295
CIL_000651 CIL_000651_0001 CGP 2:218419092-218568361

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0007010 IEA cytoskeleton organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027366 Vil1-001 protein_coding Mus_musculus 0 1953
ENSMUST00000163018 Vil1-004 retained_intron Mus_musculus 0 424
ENSMUST00000159749 Vil1-003 protein_coding Mus_musculus 0 318
ENSMUST00000161087 Vil1-002 retained_intron Mus_musculus 0 272
ENSMUST00000129173 Avil-002 protein_coding Mus_musculus 1e-39 169
ENSMUST00000026500 Avil-001 protein_coding Mus_musculus 1e-39 169

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