C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: signal transducer and activator of transcription 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000392320 STAT4-002 ENSG00000138378 9606 - 2:191029580-191151260 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartOvaryENST00000392320
Transcript ID Adipose Adrenal Brain Breast Heart Ovary
ENST00000392320 0.292±0.00 2.166±0.00 5.416±1.25 0.350±0.07 0.182±0.00 0.558±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009AM CIL_0009AM_0001 VISTA 2:190761403-191362006

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0004871 IEA signal transducer activity
GO:0005509 IEA calcium ion binding
GO:0005634 IDA:IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006468 IEA protein phosphorylation
GO:0007165 IEA signal transduction
GO:0007259 TAS JAK-STAT cascade
GO:0008283 IEA cell proliferation
GO:0019221 IEA cytokine-mediated signaling pathway
GO:0043565 IEA sequence-specific DNA binding
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter
GO:0071310 IEA cellular response to organic substance

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027277 Stat4-002 protein_coding Mus_musculus 0 2896
ENSMUST00000168302 Stat4-001 protein_coding Mus_musculus 0 2763
ENSMUST00000187053 Stat4-003 retained_intron Mus_musculus 0 577

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