C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000392541 ATP5G3-003 ENSG00000154518 9606 - 2:175178145-175181663 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000392541
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000392541 78.936±0.00 78.089±0.00 106.048±0.00 80.467±78.09 80.033±0.00 443.033±0.00 237.429±0.00 126.625±0.00 64.067±0.00 42.156±0.00 138.504±81.91 87.945±23.00 53.038±8.76

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001H6 CIL_0001H6_0001 CGP 2:175072250-175184607
CIL_0007L2 CIL_0007L2_0001 UCNEbase 2:175103181-177219808
CIL_0001H5 CIL_0001H5_0001 CGP 2:175176258-176002839

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005215 NAS transporter activity
GO:0005753 TAS mitochondrial proton-transporting ATP synthase complex
GO:0008289 IEA lipid binding
GO:0015078 IEA hydrogen ion transmembrane transporter activity
GO:0015986 IEA ATP synthesis coupled proton transport
GO:0015991 IEA ATP hydrolysis coupled proton transport
GO:0016021 IEA integral component of membrane
GO:0033177 IEA proton-transporting two-sector ATPase complex, proton-transporting domain
GO:0045263 IEA proton-transporting ATP synthase complex, coupling factor F(o)

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000018914 Atp5g3-001 protein_coding Mus_musculus 0 935
ENSMUST00000111996 Atp5g3-002 protein_coding Mus_musculus 0 933
ENSMUST00000142768 Atp5g3-004 processed_transcript Mus_musculus 0 540
ENSMUST00000131045 Atp5g3-005 processed_transcript Mus_musculus 0 424
ENSMUST00000155474 Atp5g3-003 processed_transcript Mus_musculus 0 233

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