C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000111996 Atp5g3-002 ENSMUSG00000018770 10090 - 2:73908447-73911325 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000111996
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000111996 95.236±11.94 60.875±19.74 98.183±9.66 71.627±9.22 78.670±6.31 94.090±23.67 275.874±15.51 220.749±11.86 103.511±6.56 32.033±1.63 125.252±12.93 106.461±12.95 100.508±29.43 20.446±2.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001H6 CIL_0001H6_0002 CGP 2:73816509-73911326
CIL_0007L2 CIL_0007L2_0002 UCNEbase 2:73834549-75665799
CIL_0001H5 CIL_0001H5_0002 CGP 2:73908447-74579435

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 IDA mitochondrion
GO:0008150 ND biological_process
GO:0008289 IEA lipid binding
GO:0015078 IEA hydrogen ion transmembrane transporter activity
GO:0015986 IEA ATP synthesis coupled proton transport
GO:0015991 IEA ATP hydrolysis coupled proton transport
GO:0016021 IEA integral component of membrane
GO:0045263 IEA proton-transporting ATP synthase complex, coupling factor F(o)

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000284727 ATP5G3-001 protein_coding Homo_sapiens 0 972
ENST00000392541 ATP5G3-003 protein_coding Homo_sapiens 0 933
ENST00000409194 ATP5G3-002 protein_coding Homo_sapiens 0 935
ENST00000472782 ATP5G3-005 retained_intron Homo_sapiens 0 235
ENST00000497075 ATP5G3-004 retained_intron Homo_sapiens 0 556

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