C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001H6_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000115966-ENSG00000154518 CGP 9606 2:175072250-175184607
GeneTranscriptPositionBiotype
ENSG00000115966 (ATF2)
activating transcription factor 2 		ENST00000264110 (ATF2-001) 175072250-175168206 protein_coding
ENST00000345739 (ATF2-013) 175072250-175168206 protein_coding
ENST00000392544 (ATF2-002) 175074505-175168169 protein_coding
ENST00000409437 (ATF2-011) 175072265-175151082 protein_coding
ENST00000409499 (ATF2-014) 175074505-175168169 protein_coding
ENST00000409635 (ATF2-012) 175074280-175168203 protein_coding
ENST00000409833 (ATF2-009) 175114243-175168169 protein_coding
ENST00000413123 (ATF2-017) 175126793-175168144 processed_transcript
ENST00000415955 (ATF2-007) 175074505-175168169 nonsense_mediated_decay
ENST00000417080 (ATF2-003) 175074505-175168169 nonsense_mediated_decay
ENST00000421438 (ATF2-005) 175074505-175168169 nonsense_mediated_decay
ENST00000426833 (ATF2-201) 175072254-175168206 protein_coding
ENST00000428760 (ATF2-008) 175074474-175168169 nonsense_mediated_decay
ENST00000429579 (ATF2-006) 175074505-175168169 nonsense_mediated_decay
ENST00000435004 (ATF2-021) 175074392-175130205 protein_coding
ENST00000435231 (ATF2-020) 175111647-175168168 nonsense_mediated_decay
ENST00000437522 (ATF2-015) 175113994-175168382 protein_coding
ENST00000445349 (ATF2-016) 175126993-175168382 processed_transcript
ENST00000456655 (ATF2-004) 175074505-175168169 nonsense_mediated_decay
ENST00000478905 (ATF2-018) 175080263-175093254 retained_intron
ENST00000538946 (ATF2-202) 175074288-175114812 protein_coding
ENSG00000154518 (ATP5G3)
ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9) 		ENST00000284727 (ATP5G3-001) 175176258-175184607 protein_coding
ENST00000392541 (ATP5G3-003) 175178145-175181663 protein_coding
ENST00000409194 (ATP5G3-002) 175178067-175181710 protein_coding
ENST00000472782 (ATP5G3-005) 175179645-175181695 retained_intron
ENST00000497075 (ATP5G3-004) 175178186-175181710 retained_intron

Homo sapiens Ensembl (GRCh38)

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CIL_0001H6_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027104-ENSMUSG00000018770 CGP 10090 2:73816509-73911326
GeneTranscriptPositionBiotype
ENSMUSG00000018770 (Atp5g3)
ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) 		ENSMUST00000018914 (Atp5g3-001) 73908447-73911326 protein_coding
ENSMUST00000111996 (Atp5g3-002) 73908447-73911325 protein_coding
ENSMUST00000131045 (Atp5g3-005) 73909183-73910459 processed_transcript
ENSMUST00000142768 (Atp5g3-004) 73908731-73911282 processed_transcript
ENSMUST00000155474 (Atp5g3-003) 73909318-73911291 processed_transcript
ENSMUSG00000027104 (Atf2)
activating transcription factor 2 		ENSMUST00000055833 (Atf2-005) 73816509-73892614 protein_coding
ENSMUST00000090802 (Atf2-006) 73816509-73892612 protein_coding
ENSMUST00000100009 (Atf2-201) 73816524-73863290 protein_coding
ENSMUST00000112007 (Atf2-002) 73816509-73892631 protein_coding
ENSMUST00000112010 (Atf2-008) 73816509-73892536 protein_coding
ENSMUST00000112016 (Atf2-001) 73816509-73892639 protein_coding
ENSMUST00000112017 (Atf2-202) 73818266-73892555 protein_coding
ENSMUST00000124737 (Atf2-015) 73816509-73845505 protein_coding
ENSMUST00000125159 (Atf2-009) 73862969-73892628 processed_transcript
ENSMUST00000128531 (Atf2-011) 73845440-73892553 protein_coding
ENSMUST00000129555 (Atf2-014) 73845734-73850604 processed_transcript
ENSMUST00000136958 (Atf2-013) 73829801-73892530 protein_coding
ENSMUST00000138098 (Atf2-010) 73862876-73892594 processed_transcript
ENSMUST00000141050 (Atf2-003) 73844869-73892628 processed_transcript
ENSMUST00000143714 (Atf2-004) 73826359-73892613 processed_transcript
ENSMUST00000154456 (Atf2-016) 73845439-73892593 protein_coding
ENSMUST00000154965 (Atf2-012) 73873274-73892550 processed_transcript
ENSMUST00000156455 (Atf2-007) 73816520-73892628 processed_transcript
ENSMUST00000173010 (Atf2-017) 73818822-73863238 nonsense_mediated_decay
ENSMUSG00000097377 (Gm10822)
predicted gene 10822 		ENSMUST00000181596 (Gm10822-201) 73892996-73900850 lincRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001H6_0001ENSG00000115966ENST00000264110ENST00000345739ENST00000392544ENST00000409437ENST00000409499ENST00000409635ENST00000409833ENST00000413123ENST00000415955ENST00000417080ENST00000421438ENST00000426833ENST00000428760ENST00000429579ENST00000435004ENST00000435231ENST00000437522ENST00000445349ENST00000456655ENST00000478905ENST00000538946ENSG00000154518ENST00000284727ENST00000392541ENST00000409194ENST00000472782ENST00000497075CIL_0001H6_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001H6_0001ENSG00000115966ENST00000264110ENST00000345739ENST00000392544ENST00000409437ENST00000409833ENST00000426833ENST00000428760ENST00000435231ENST00000437522ENST00000456655ENST00000538946ENSG00000154518ENST00000284727ENST00000392541ENST00000409194ENST00000497075CIL_0001H6_0002ENSMUSG00000018770ENSMUST00000018914ENSMUST00000111996ENSMUST00000155474ENSMUSG00000027104ENSMUST00000055833ENSMUST00000090802ENSMUST00000100009ENSMUST00000112007ENSMUST00000112010ENSMUST00000112016ENSMUST00000112017ENSMUST00000124737ENSMUST00000128531ENSMUST00000143714ENSMUST00000173010ENSMUSG00000097377ENSMUST00000181596
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000115966 ENST00000264110 5.145±0.00 1.778±0.00 N/A 7.764±2.18 4.410±0.00 2.120±0.48 1.197±0.00 1.182±0.00 2.081±0.00 N/A 2.483±0.00 4.582±1.84 1.989±0.43 10.836±0.00
ENST00000345739 N/A 1.633±0.00 0.796±0.00 N/A 1.663±0.00 2.885±1.02 N/A 4.495±0.00 3.149±0.00 1.868±0.30 0.950±0.00 1.627±0.05 1.206±0.21 N/A
ENST00000392544 N/A N/A N/A N/A N/A 2.701±0.00 0.796±0.00 2.318±0.00 2.855±0.00 5.171±0.00 N/A N/A N/A N/A
ENST00000409437 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.376±0.00 1.956±0.00 4.587±0.00
ENST00000409499 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000409635 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000409833 N/A N/A N/A N/A 1.733±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000413123 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000415955 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000417080 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000421438 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000426833 N/A 0.782±0.00 N/A 3.611±0.00 2.727±0.00 N/A 2.362±0.00 N/A 1.619±0.00 4.065±0.00 0.268±0.00 N/A N/A N/A
ENST00000428760 N/A N/A N/A N/A N/A 1.596±0.00 N/A N/A N/A N/A 1.340±0.00 2.267±0.00 N/A N/A
ENST00000429579 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000435004 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000435231 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.646±0.00 N/A N/A N/A
ENST00000437522 N/A N/A N/A N/A N/A N/A N/A 1.830±0.00 N/A N/A N/A N/A N/A N/A
ENST00000445349 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000456655 N/A N/A 1.042±0.00 N/A 1.938±0.00 N/A 0.816±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000478905 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000538946 N/A N/A 3.554±0.00 N/A N/A N/A N/A N/A N/A N/A 2.993±0.00 N/A N/A 8.953±0.00
ENSG00000154518 ENST00000284727 N/A 1.368±0.00 0.969±0.00 1.995±0.02 1.512±0.72 1.687±0.25 1.184±0.00 4.453±2.05 1.721±0.75 N/A 0.794±0.00 1.360±0.29 1.630±0.00 1.890±0.29
ENST00000392541 78.936±0.00 78.089±0.00 N/A 106.048±0.00 80.467±78.09 80.033±0.00 443.033±0.00 237.429±0.00 126.625±0.00 64.067±0.00 42.156±0.00 138.504±81.91 87.945±23.00 53.038±8.76
ENST00000409194 N/A N/A 3.267±0.00 17.048±0.00 1.855±0.00 17.090±0.00 24.533±0.00 13.953±0.00 3.396±0.00 2.854±0.00 45.212±0.00 34.423±18.90 65.176±40.89 N/A
ENST00000472782 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497075 N/A N/A 2.714±0.00 3.401±0.00 1.218±0.00 5.705±0.00 5.758±0.00 3.702±0.00 1.273±0.00 3.818±0.61 6.355±0.00 3.869±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000018770 ENSMUST00000018914 248.702±39.40 134.114±45.27 235.074±31.36 204.503±32.04 367.833±126.05 276.759±52.68 1237.700±21.17 701.738±42.77 344.577±21.61 125.603±13.98 446.188±39.89 333.147±74.32 305.058±114.29 51.547±11.33
ENSMUST00000111996 95.236±11.94 60.875±19.74 98.183±9.66 71.627±9.22 78.670±6.31 94.090±23.67 275.874±15.51 220.749±11.86 103.511±6.56 32.033±1.63 125.252±12.93 106.461±12.95 100.508±29.43 20.446±2.21
ENSMUST00000131045 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142768 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155474 N/A 435.690±83.99 N/A N/A N/A 211.809±72.44 N/A N/A N/A N/A N/A 216.247±56.28 N/A N/A
ENSMUSG00000027104 ENSMUST00000055833 2.551±0.68 N/A 1.968±0.00 3.122±0.00 2.969±0.00 N/A 1.468±0.51 1.662±0.53 1.221±0.00 3.839±0.80 0.421±0.01 2.601±0.00 2.777±0.00 N/A
ENSMUST00000090802 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.646±0.00 N/A N/A N/A
ENSMUST00000100009 3.120±0.35 3.166±1.32 3.840±0.00 6.045±3.53 2.552±1.21 3.213±1.30 0.837±0.13 2.735±1.26 1.988±0.61 2.551±0.80 0.808±0.20 4.655±1.28 3.994±2.23 N/A
ENSMUST00000112007 1.341±0.00 2.112±0.92 1.206±0.00 N/A N/A 1.817±0.25 1.049±0.35 2.260±0.41 0.689±0.09 3.131±1.48 0.746±0.08 1.748±0.00 1.760±0.00 3.140±1.59
ENSMUST00000112010 0.941±0.00 N/A N/A N/A 1.694±0.58 N/A 1.386±0.21 1.482±0.10 1.540±0.50 1.820±0.00 1.353±0.65 2.951±1.37 4.001±1.52 2.726±0.24
ENSMUST00000112016 N/A N/A 2.091±0.55 4.413±1.42 N/A N/A N/A N/A 1.219±0.00 N/A 0.742±0.20 3.079±0.79 1.712±0.30 N/A
ENSMUST00000112017 N/A N/A N/A 5.488±0.00 N/A N/A N/A N/A N/A N/A N/A 4.617±0.00 4.353±1.24 2.641±0.38
ENSMUST00000124737 N/A N/A 2.648±0.00 4.187±1.20 N/A N/A N/A N/A 2.478±0.57 N/A N/A 3.357±1.26 3.481±0.81 N/A
ENSMUST00000125159 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128531 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.712±0.00 N/A
ENSMUST00000129555 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136958 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138098 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141050 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143714 N/A N/A N/A N/A 1.922±0.00 N/A N/A N/A N/A N/A N/A 1.710±0.56 N/A N/A
ENSMUST00000154456 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154965 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156455 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173010 N/A 1.819±0.42 N/A N/A 2.721±0.91 2.103±0.46 N/A 2.572±0.00 1.112±0.00 2.582±0.00 N/A N/A N/A 11.938±2.70
ENSMUSG00000097377 ENSMUST00000181596 0.089±0.03 0.130±0.02 0.045±0.00 0.094±0.00 0.084±0.01 0.115±0.07 0.035±0.01 0.075±0.04 0.023±0.01 0.082±0.05 0.026±0.01 0.266±0.16 0.054±0.02 0.083±0.04

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