C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ataxin 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000393287 ATXN3-201 ENSG00000066427 9606 - 14:92058552-92106621 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainColonLiverLungOvaryPlacentaTestisENST00000393287
Transcript ID Adipose Brain Colon Liver Lung Ovary Placenta Testis
ENST00000393287 1.053±0.00 1.867±0.00 2.178±1.00 4.562±0.00 2.762±1.80 2.060±0.75 0.698±0.00 1.825±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002LX CIL_0002LX_0002 CGP 14:91869412-92040896

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006508 IEA proteolysis
GO:0008242 IEA omega peptidase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021606 Atxn3-001 protein_coding Mus_musculus 0 665
ENSMUST00000159883 Atxn3-004 protein_coding Mus_musculus 0 558
ENSMUST00000161011 Atxn3-002 protein_coding Mus_musculus 0 558
ENSMUST00000160251 Atxn3-003 protein_coding Mus_musculus 0 532
ENSMUST00000160186 Atxn3-005 nonsense_mediated_decay Mus_musculus 0 326

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