C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAP1B, member of RAS oncogene family
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000393436 RAP1B-002 ENSG00000127314 9606 + 12:68610858-68660522 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000393436
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000393436 50.395±0.00 54.350±0.00 7.001±0.00 12.084±3.66 40.108±15.97 35.202±14.25 8.058±4.62 28.043±10.76 19.798±5.00 44.061±18.69 4.453±3.06 38.083±16.23 57.845±8.99 49.835±0.92

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 IDA:IEA GTPase activity
GO:0005515 IPI protein binding
GO:0005525 IEA:IDA GTP binding
GO:0005622 IDA:IEA intracellular
GO:0005811 IDA lipid particle
GO:0005829 IDA cytosol
GO:0005886 TAS plasma membrane
GO:0005911 IDA cell-cell junction
GO:0006112 TAS energy reserve metabolic process
GO:0006184 IEA GTP catabolic process
GO:0006886 IEA intracellular protein transport
GO:0006913 IEA nucleocytoplasmic transport
GO:0007165 IEA signal transduction
GO:0007264 IEA small GTPase mediated signal transduction
GO:0007596 TAS blood coagulation
GO:0015031 IEA protein transport
GO:0016020 IEA:TAS membrane
GO:0019003 IDA GDP binding
GO:0030168 TAS platelet activation
GO:0032403 IDA protein complex binding
GO:0032486 IMP Rap protein signal transduction
GO:0044281 TAS small molecule metabolic process
GO:0050796 TAS regulation of insulin secretion
GO:0061028 IMP establishment of endothelial barrier
GO:0070062 IDA extracellular vesicular exosome
GO:0071320 IDA cellular response to cAMP
GO:1901888 IMP regulation of cell junction assembly
GO:2000114 IMP regulation of establishment of cell polarity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000064667 Rap1b-201 protein_coding Mus_musculus 0 2868

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