C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sideroflexin 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000393459 SFXN3-001 ENSG00000107819 9606 + 10:101031234-101041244 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainHeartLiverLungMuscleOvaryTestisENST00000393459
Transcript ID Adrenal Brain Heart Liver Lung Muscle Ovary Testis
ENST00000393459 3.072±0.00 9.516±0.00 3.992±0.00 1.003±0.00 3.314±0.49 1.522±0.00 8.054±3.20 1.908±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008BD CIL_0008BD_0001 VISTA 10:100486833-101088338
CIL_0007U1 CIL_0007U1_0001 VISTA 10:100491715-101092615
CIL_000940 CIL_000940_0001 VISTA 10:100919065-101519843
CIL_0005NG CIL_0005NG_0001 CGP 10:101007683-101041244
CIL_0005NF CIL_0005NF_0001 CGP 10:101031234-101068131

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006811 IEA ion transport
GO:0015075 IEA ion transmembrane transporter activity
GO:0016020 IEA membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000062213 Sfxn3-201 protein_coding Mus_musculus 0 1349
ENSMUST00000084493 Sfxn3-202 protein_coding Mus_musculus 0 891
ENSMUST00000111954 Sfxn3-203 protein_coding Mus_musculus 0 802
ENSDART00000023654 sfxn1-201 protein_coding Danio_rerio 0 243
ENSDART00000133811 sfxn1-001 protein_coding Danio_rerio 0 243

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