C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000393779 AC104297.1-001 ENSG00000213383 9606 - 3:17871729-17872598 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000393779
Transcript ID Adrenal Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000393779 0.013±0.00 0.025±0.00 0.012±0.00 0.011±0.00 0.034±0.00 0.037±0.00 0.254±0.21 0.033±0.00 0.013±0.00 0.023±0.00 0.045±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004HQ CIL_0004HQ_0001 CGP 3:17157162-18445588
CIL_0007OK CIL_0007OK_0001 UCNEbase 3:17286171-18992888
CIL_0007ZY CIL_0007ZY_0001 VISTA 3:17646140-18247453
CIL_000816 CIL_000816_0001 VISTA 3:17827870-18428745

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000020286 Ppa1-001 protein_coding Mus_musculus 0 870
ENSMUST00000119348 Gm13500-001 processed_pseudogene Mus_musculus 0 558

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