C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: R3H domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000393811 R3HDM2-005 ENSG00000179912 9606 - 12:57253762-57297033 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; LungOvaryPlacentaENST00000393811
Transcript ID Lung Ovary Placenta
ENST00000393811 2.095±0.00 11.992±0.00 3.847±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000164161 R3hdm2-008 nonsense_mediated_decay Mus_musculus 0 2994
ENSMUST00000169888 R3hdm2-004 protein_coding Mus_musculus 0 2785
ENSMUST00000105249 R3hdm2-006 protein_coding Mus_musculus 0 2785
ENSMUST00000164831 R3hdm2-002 protein_coding Mus_musculus 0 2763
ENSMUST00000064793 R3hdm2-003 protein_coding Mus_musculus 0 2241
ENSMUST00000105250 R3hdm2-202 protein_coding Mus_musculus 0 2237
ENSMUST00000077046 R3hdm2-201 protein_coding Mus_musculus 0 2237
ENSMUST00000105251 R3hdm2-005 protein_coding Mus_musculus 0 2237
ENSMUST00000170336 R3hdm2-007 protein_coding Mus_musculus 0 2237
ENSMUST00000166820 R3hdm2-001 protein_coding Mus_musculus 0 2237
ENSMUST00000191337 RP23-424A2.2-001 processed_pseudogene Mus_musculus 0 1339
ENSMUST00000171823 R3hdm2-018 processed_transcript Mus_musculus 0 553
ENSMUST00000168268 R3hdm2-015 retained_intron Mus_musculus 0 538
ENSMUST00000168079 R3hdm2-017 protein_coding Mus_musculus 0 525
ENSMUST00000171426 R3hdm2-016 protein_coding Mus_musculus 0 466
ENSMUST00000164469 R3hdm2-014 retained_intron Mus_musculus 0 366
ENSMUST00000165440 R3hdm2-019 protein_coding Mus_musculus 2.99878e-43 182
ENSMUST00000163794 R3hdm2-013 retained_intron Mus_musculus 2e-29 135

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